| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_1261 |
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| Symbol | tpiA |
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| ID | 4668329 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax citrulli AAC00-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008752 |
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| Strand | + |
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| Start bp | 1386478 |
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| End bp | 1387233 |
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| Gene Length | 756 bp |
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| Protein Length | 251 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 639822454 |
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| Product | triosephosphate isomerase |
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| Protein accession | YP_969626 |
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| Protein GI | 120609948 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0149] Triosephosphate isomerase |
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| TIGRFAM ID | [TIGR00419] triosephosphate isomerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.168128 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACAAAGA AGAAACTCAT CGCGGGCAAC TGGAAGATGA ATGGCACCCT GGGTGCCAAT
GCCGCGCTGC TGCAGGCGCT GCGCGGCGGC CTCGAGGCGG GCGCGTACCA GAACGTGGAT
GTGGCCGTGG CGGTGCCGGC GGCCTACCTC GCGCAGGTGC AGGGCCTGGT CGAAGGCTCG
GCCATCGCGC TGGCGGCGCA GGACGTGTCC CGGCACGAAG CGGGCGCCTA CACGGGCGAG
GTCTCCGCGG CGATGCTCCA GGAATTCGGC GTGCGCTACG TGCTGGTCGG GCATTCCGAG
CGCCGCCAGT ACCACGGCGA GACCGACGAG CAGGTGGCCG AGAAGGCGCA GCGCGCACTG
GCCGCCGGCA TCACGCCGGT GGTATGCGTG GGCGAGACGC TGGCCGAGCG CGAGGCCGGA
CAGACCGAAG CCGTGGTCAA GCGCCAGCTG GCCGCGGTCA TCCACCTGAA CGGTCATTGC
ATCAGCGAGA CCGTGGTGGC CTACGAGCCC GTCTGGGCCA TCGGCACCGG TCGCACCGCC
ACGCCCGAGC AGGCACAGCA GGTGCATGCC GTGCTGCGCG CGCAGCTCGC GGCTGCCAGC
GAGCATGCGG ACCGCATCCG CCTGCTCTAC GGCGGCAGCA TGAACGCCGC GAACGCGGCC
GCATTGCTGG CCCAGCCCGA CATCGACGGA GGCCTCGTGG GCGGCGCATC GCTCAAGGCC
CAGGACTTTT TGCAGATCAT CGCAGCGGCC GCCTGA
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| Protein sequence | MTKKKLIAGN WKMNGTLGAN AALLQALRGG LEAGAYQNVD VAVAVPAAYL AQVQGLVEGS
AIALAAQDVS RHEAGAYTGE VSAAMLQEFG VRYVLVGHSE RRQYHGETDE QVAEKAQRAL
AAGITPVVCV GETLAEREAG QTEAVVKRQL AAVIHLNGHC ISETVVAYEP VWAIGTGRTA
TPEQAQQVHA VLRAQLAAAS EHADRIRLLY GGSMNAANAA ALLAQPDIDG GLVGGASLKA
QDFLQIIAAA A
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