Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Aave_1233 |
Symbol | |
ID | 4666479 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax citrulli AAC00-1 |
Kingdom | Bacteria |
Replicon accession | NC_008752 |
Strand | - |
Start bp | 1357531 |
End bp | 1357938 |
Gene Length | 408 bp |
Protein Length | 135 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 639822426 |
Product | hypothetical protein |
Protein accession | YP_969598 |
Protein GI | 120609920 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.0136736 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCCATCA GCTGGATCAC GGCACTGCAG CTCGTCCCGT GGGACAAGGT GATCGAAGCC TCTCCGCAGC TCATCAAGGC CGCGAAGGGG TTGCTGCGCA GCCGTGGAGC CCAGGAAGCC GAACAGGCGC AGGCGGACGA GGAGGCCGCA CGCCTGGCGG CATCCACCGC CCCGTCGCCA CAGGAACTGG CCCTGCAGCG CATCGGCGCC CTGGAGGACC AGGTGCAGGC GCTGGAGCAA TCGCAGCGCC AGGCCCTGGA GGTCATCGAG CAGCTGGCCC AGCAGAACGC CCAGCTCGTC GCCACCGTGA GCGCCCTGCG CACGGGCGCG CAGCGCCTGG CGGTGGCCTG CGGGGTGCTG GGCGTGGTGC TGCTGGGGAT GGTGGCCTAC ACCGTCGCCA GGGCGTAG
|
Protein sequence | MAISWITALQ LVPWDKVIEA SPQLIKAAKG LLRSRGAQEA EQAQADEEAA RLAASTAPSP QELALQRIGA LEDQVQALEQ SQRQALEVIE QLAQQNAQLV ATVSALRTGA QRLAVACGVL GVVLLGMVAY TVARA
|
| |