Gene Aave_1210 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_1210 
Symbol 
ID4666893 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp1332893 
End bp1334014 
Gene Length1122 bp 
Protein Length373 aa 
Translation table11 
GC content70% 
IMG OID639822403 
Productglycosyl transferase, group 1 
Protein accessionYP_969575 
Protein GI120609897 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0438] Glycosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.0448845 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAAGTCC TGCAGGTCAT CACCAAAGGC GAGACAGGGG GAGCGCAGAG CCATGTGCGC 
ACACTGTGCG CCGCGCTCTC CACGCAGGGG GTGGCAGTGC AGGCCGCCAT CGGCGGAGCC
GGCCCGCTTT CTCCCTTGGG CAGGTATCTG GAAACCCTGG GCCTGCATGT GCATGGCATT
CCCTTGCTGG ACAACGGCTT GCGACCGGTC CGCCTCCTGC GGGCCACGCG TGATCTGCTC
CGCATCGTGC GAGCGGAGTC TCCGGACCTG CTGCACGCCC ACAGCGCCAT GGCGGGCGTC
GCAGCGCGTA TCGCCGGGGC ATTGTCGGGT GTTCCCGTGA TCTACACCGT GCACGGCTTC
GCATTCAAGG CCGGCAATGC CTGGCCGCGC CGGGCGGTGG CCTGGACCAC CGAGGCGCTG
CTGGCCCCGC TGACCAGCCG CATGGTCTGC GTCTCGGAAC ACGAGCGTGC CCTTGCGCGC
AGCCTGCCGC TGCCGAGCTG GCGCCTGGAG ACCGTCGTGA ACGGCGTTGA CGACATCGCC
GTTCCCGCCG ATGCCACGGC ATGGAAGCGC GAAGGCACTT CGGTCGCCAT GGTCGCCCGC
ATGGCACCGC CGAAGCGGCA CGACCTGCTG CTGCATGCCC TGGCCCGGCT CAGGGACACG
ACCGGACAGC ATGGCTCCGC CACGCTCCTG GGGGACGGCC CCGACAGGCC GGCCCACGAA
GCGCTGGCAG CCCGCCTCGG CCTGCAGTCG TCGGTCGATT TCAAGGGGGA CGTGGACGAC
GTACCCGCGC AGCTCGCACG CCACGGGATC TTCGTGCTCA TGTCGGACCA CGAAGGACTG
CCCGTTTCGC TCATCGAGGC GATGCGTGCG GGCATGGCGA TCGTGGCCAG CGATCTGCCT
GGCGTGCGCG AGCTGCTGCC CGAACCCGGG CACGCCCTGC TCGTGCCCGC GGACCCGGAA
GCCCTCGCCG CTGCACTGCG ACAATTGATG GAGTCCCCCG CGCTGCGCGC CCGGCTCGGC
GCTGCCGCAC GGCAGCGCTA CGAACGGCAC TACACCGCCG AGCGCATGGG GTCTGCGGTG
CGCGACGTCT ATGCCGCCGC CCTGCGGCGT TCCCGCTCCT GA
 
Protein sequence
MKVLQVITKG ETGGAQSHVR TLCAALSTQG VAVQAAIGGA GPLSPLGRYL ETLGLHVHGI 
PLLDNGLRPV RLLRATRDLL RIVRAESPDL LHAHSAMAGV AARIAGALSG VPVIYTVHGF
AFKAGNAWPR RAVAWTTEAL LAPLTSRMVC VSEHERALAR SLPLPSWRLE TVVNGVDDIA
VPADATAWKR EGTSVAMVAR MAPPKRHDLL LHALARLRDT TGQHGSATLL GDGPDRPAHE
ALAARLGLQS SVDFKGDVDD VPAQLARHGI FVLMSDHEGL PVSLIEAMRA GMAIVASDLP
GVRELLPEPG HALLVPADPE ALAAALRQLM ESPALRARLG AAARQRYERH YTAERMGSAV
RDVYAAALRR SRS