Gene Aave_1167 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_1167 
SymbolrpsT 
ID4666493 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp1287828 
End bp1288127 
Gene Length300 bp 
Protein Length99 aa 
Translation table11 
GC content64% 
IMG OID639822361 
Product30S ribosomal protein S20 
Protein accessionYP_969533 
Protein GI120609855 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0268] Ribosomal protein S20 
TIGRFAM ID[TIGR00029] ribosomal protein S20 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCATCTG CCAAGCCCAA GAAAAAGAAC CCCCGCCTCG CCTCCGGCCG CAAGCGCGCG 
CGCCAGGACG TGAAGCTGAA CGCAGCCAAC ACCTCGCTGC GCTCGAAGTA CCGCACCGCC
GTCAAGAACG TCGAGAAGGC CGTTCTGGCC GGCGACAAGA CGAAGGCGTC CGAACTGTTC
GCCAAGATGC AGTCCGTGGT CGACACGATC GCCGACAAGG GCATCTTCCA CAAGAACAAG
GCCGCTCGCG ACAAGAGCCG CCTGTCCGCC AAGGTGAAAG CCCTGGCACT GGCCGCCTGA
 
Protein sequence
MASAKPKKKN PRLASGRKRA RQDVKLNAAN TSLRSKYRTA VKNVEKAVLA GDKTKASELF 
AKMQSVVDTI ADKGIFHKNK AARDKSRLSA KVKALALAA