Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Aave_1137 |
Symbol | |
ID | 4665611 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax citrulli AAC00-1 |
Kingdom | Bacteria |
Replicon accession | NC_008752 |
Strand | + |
Start bp | 1249531 |
End bp | 1250865 |
Gene Length | 1335 bp |
Protein Length | 444 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 639822333 |
Product | hypothetical protein |
Protein accession | YP_969505 |
Protein GI | 120609827 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3408] Glycogen debranching enzyme |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0252196 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.2716 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGACAGTT CCGCGTCCGG CTGCACAATG GAACCTGTGC CGGTTCCGAT GCTCCATGCC CGAAAGGGCG CCGGGCCGCA CGGCCCTGTG GGGCTGCCGG GCGCATGCCG CGTCCGCTGC CCGCCCGCCA GCCCATCGCA TGCCATGACA GACCATTCCC TCGACGCCCA CTCCCTCGCG CTGATCGATG CCTGTTCGGA AGCCTCCCTC GCGCTGCTCG AACGCAACCT CACGCCCCAC GGCATCCTGG CCGCGAGCCG CACCGCGGCG GCGGTGGCCC GGCGCTACAC GCGGATCTTC GGGCGCGACG CGGCCATGTG CGTCATGGCG ATGTGCGGCA CCGGCGTGCC GTCCCTGGAA GAGGGCGCCG TGGCCAGCCT CGACGCGCTG GCCTCGCAGC AGGCTCCCAA CGGGCAGATT CCCAAGTACG TGGACCCGGA AGGCCGCGAC GCGGACTTCT GGTACCTGGG CTGCATCGAC GCCACTCTGT GGTGGCTGAT CGCGGTGGAC CACGTGCGCC GCCACGGCGC GGTGGAGGGG GACCGCTGGG CGGATGGCGT CGAGCGCGCC ATCGGCTGGC TGCTCGCGCA GGAGCACCAG CATTTCCGGC TGCTGCAGCA GAACGAGGCC AGCGACTGGG CGGACATCAT GCCGCGCTCG GGGTACGTGC TCTACACCAA CGCCCTGTGG TTCGACGTCA AGCGCCGCTT CTCGCTCTGC CAGGCGGACG ACACGCACCA CCACTTCAAC CATCTCTTCA ACCCGTTCCA GCGCGACCTG CCCGAATACC ACCGCGCCCG GCTGCTGCAG CACTACGCCC GGCGCGGCCG GCGCGACCCG GGCCTGTTCC TGAGCTTCGT GAACCTGGCG GTGGTGGGCG ACGAGGGCGA TGTGTTCGGC AACCTGCTGG CCATCCAGTC CGGCCTCGCC GACGAGGCGA TGGCGCACAG CATCGTCAAC ACCATCGAGG CCGCCCATGC GGGCAGCTCC CTGCCCGTGC GCGTCGTGCT GCATCCGCTG TCCCACGAGC ACGACCTGTG GCGGGCCTAC ATGGGCCGGC ACCGCCAGAA CCTCATGCAC CAGTACCACA ACGGCGGCAT CTGGCCCTTC GTCGGCGGCT TCTGGGTGAT GGCGCTGGCC CGCCTGGGCC TGCGCCGCGC CGGCTGGACC GAACTGGCGA AGCTGGCCCA CGCCAATGCG CTCGACGACT GGCGCTTCAC CGAGTGGTTC CACGGCCGCA CGCTGGTGCC CATGGGCATG GCGGGCCAGA GCTGGAACGC GGCCACCTTC CTGCTGGCCC GGCGCGCGCT GCAGGGGCTC GATTCCGCCT GGTAG
|
Protein sequence | MDSSASGCTM EPVPVPMLHA RKGAGPHGPV GLPGACRVRC PPASPSHAMT DHSLDAHSLA LIDACSEASL ALLERNLTPH GILAASRTAA AVARRYTRIF GRDAAMCVMA MCGTGVPSLE EGAVASLDAL ASQQAPNGQI PKYVDPEGRD ADFWYLGCID ATLWWLIAVD HVRRHGAVEG DRWADGVERA IGWLLAQEHQ HFRLLQQNEA SDWADIMPRS GYVLYTNALW FDVKRRFSLC QADDTHHHFN HLFNPFQRDL PEYHRARLLQ HYARRGRRDP GLFLSFVNLA VVGDEGDVFG NLLAIQSGLA DEAMAHSIVN TIEAAHAGSS LPVRVVLHPL SHEHDLWRAY MGRHRQNLMH QYHNGGIWPF VGGFWVMALA RLGLRRAGWT ELAKLAHANA LDDWRFTEWF HGRTLVPMGM AGQSWNAATF LLARRALQGL DSAW
|
| |