Gene Aave_1084 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_1084 
Symbol 
ID4665887 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp1187599 
End bp1188621 
Gene Length1023 bp 
Protein Length340 aa 
Translation table11 
GC content71% 
IMG OID639822282 
ProductTat pathway signal sequence domain-containing protein 
Protein accessionYP_969454 
Protein GI120609776 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAACGAC GCCAGTTTCT CTCACGCTCC CTCGCCACCA CCGCCGCGCT GGGCGCGCCG 
TTCGCGCCCT TCGTCCATGC GCAGGGCACG CCCGTGCCGC TGAAGTTCAC GCTCGACTTC
CGCGTCACCA GCCAGACTTC GCCCTTCTTC CTCGCGCTCG CCAAGGGCTA CTACAAAGAA
GAGGGACTGG ACGTGAGCAT CGACGTGGGC TCGGGCTCCG TGGCGTCCAT CACGCGCGTG
GCCAGCGGCG CCTACGACCT GGGCCTCGGC GACCTCAGCT CCCTGGTCGA GTTCCAGGCC
CAGAACCCCG GCACGCCCGT GCAGGCCATC TACCAGTACT ACCAGCGCGC GCCCTTCGTC
ATCATCGGCC GCAAGGACCG CGGCATCACC ACCGACTTTC TTTCGCTCAA GGGCAAGCGC
GTGGCCGCGG CCGCCGTGGA GTCCACGCGC CGCTGCTGGC CCATGGTGGC GCGCGCGCTC
AAGACCGGCC CCGACCTCTT CGAGTGGGTG ACGACCGACT TCGGCGCCCG CGACAACGTG
GTGGTGCGCG GCGACGTCGA TGCAGCCACC TATTTCCACG ACTCCGCCGT ATCGCTGTTC
GCGCGCATGC CGCCCAGGGA CCTCGCCGTG CTCGAATACG GCAAGGCCGG GCTGCACCTG
TACGGCAACG CACTGCTGGC GGGCCGGCTG CTGCAGGAAA AGCCCGAGGC GGCGCGCGGC
TTCCTGCGCG CAACGCAGCG GGCACTGCGC GAAACCCTCG CCGGCCCCGA GGCGGCGCTG
GTCGCCATCA AGGCGCGCGA GCCCATCCTC AACATGGATG TGGAGCGCGA GCGCTGGTCC
ATCACCCGGC AGTACCTGGC GCCGCCCGAC CTGCCGGCCC AGGCGCTGGG CAGCGTGCAG
CCCGGCGTGC TGGCGCGGCA GATCGACGAA GTGGCCACCG TGTTCCAGCT GGCCGCGAAG
CCAGCGCCCG AGCGGGTGTA CAACCCCGGC TTCCTGCCCG CGGGCGCGAA AGGCGCCGCA
TGA
 
Protein sequence
MQRRQFLSRS LATTAALGAP FAPFVHAQGT PVPLKFTLDF RVTSQTSPFF LALAKGYYKE 
EGLDVSIDVG SGSVASITRV ASGAYDLGLG DLSSLVEFQA QNPGTPVQAI YQYYQRAPFV
IIGRKDRGIT TDFLSLKGKR VAAAAVESTR RCWPMVARAL KTGPDLFEWV TTDFGARDNV
VVRGDVDAAT YFHDSAVSLF ARMPPRDLAV LEYGKAGLHL YGNALLAGRL LQEKPEAARG
FLRATQRALR ETLAGPEAAL VAIKAREPIL NMDVERERWS ITRQYLAPPD LPAQALGSVQ
PGVLARQIDE VATVFQLAAK PAPERVYNPG FLPAGAKGAA