| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_1046 |
|---|
| Symbol | |
|---|
| ID | 4669491 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax citrulli AAC00-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008752 |
|---|
| Strand | + |
|---|
| Start bp | 1151226 |
|---|
| End bp | 1152089 |
|---|
| Gene Length | 864 bp |
|---|
| Protein Length | 287 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 639822245 |
|---|
| Product | aldose 1-epimerase |
|---|
| Protein accession | YP_969417 |
|---|
| Protein GI | 120609739 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0676] Uncharacterized enzymes related to aldose 1-epimerase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACAGCCA CCGCTCCGGC CGTGCCCGCG GCCTCCCTCC CGCCGTTTCC GGACCTGCCC
GCCGTCCGGC TGCACGGCCC CCGGGCAGGC GCCGCCACCG TCGCTTTCCA AGGGGCGCAG
GTGCTTTCCT GGACCACCGC GGACGGCGTC GAGCGCCTTT TTCTGAGCCC CCGGTCGGCC
CATGACGGAC ACACGGCGAT CCGCGGCGGG GTGCCGGTTT GCTGCCCCCA ATTCAACCAG
CGGGGGGCTT TGCCCAAGCA TGGCTTTATG CGAAATTTGC CTTGGAAATT GGTATCCGAG
TCGTCAAACG GTCACGTGAC GGGTGCCGTG ATGGCGCTCG GGGACGACGA GGCCACCCGC
GCGCTCTGGC CCCATGCCTT CCAGGCCCTG CTGGCCGTGG AGCTGTCCGA AGACGCCCTG
CGCCTGTCGC TCACCCTGCG CAACACCGGT GATGCGCCCT GGTCCTTCAC CGGCGCGCTG
CATACCTATC TGCGGGTGGC GGACATCGCC CGGGCGCAGG TGGACGGGCT GCAGGGCTGC
GCCCGCTGGG ACGCCGTCGC CGACCGGCGC GGCATGCAGG AAGGCGCGGT GCGCTTCGAC
GGTGAATACG ACAGCGTGTT CGAGGCCCCG GGCGCGCCGC TGCGCGTGGA CACGGGGCAG
GGCGTGCTGG CCGCCACCCA GGGCGGCTGG GCCGAGAATG TCGTCTGGAA TCCCGGCGCC
CAGCGCTGCG CGGCGCTGCC GGACATGCCC GGGGACGGCT TCCGCCACAT GCTGTGCGTG
GAGGCTGCCT GCGTGCACCG GCCCGTCGAA GTGGCGCCGG GCGCCGAATG GACCGGCTGG
CAGCGGTTCG AAGTGCTGCG CTGA
|
|---|
| Protein sequence | MTATAPAVPA ASLPPFPDLP AVRLHGPRAG AATVAFQGAQ VLSWTTADGV ERLFLSPRSA
HDGHTAIRGG VPVCCPQFNQ RGALPKHGFM RNLPWKLVSE SSNGHVTGAV MALGDDEATR
ALWPHAFQAL LAVELSEDAL RLSLTLRNTG DAPWSFTGAL HTYLRVADIA RAQVDGLQGC
ARWDAVADRR GMQEGAVRFD GEYDSVFEAP GAPLRVDTGQ GVLAATQGGW AENVVWNPGA
QRCAALPDMP GDGFRHMLCV EAACVHRPVE VAPGAEWTGW QRFEVLR
|
|---|
| |