Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Aave_1007 |
Symbol | |
ID | 4667280 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax citrulli AAC00-1 |
Kingdom | Bacteria |
Replicon accession | NC_008752 |
Strand | + |
Start bp | 1104875 |
End bp | 1105579 |
Gene Length | 705 bp |
Protein Length | 234 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 639822207 |
Product | hypothetical protein |
Protein accession | YP_969379 |
Protein GI | 120609701 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1943] Transposase and inactivated derivatives |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.849512 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCCGCC TTCCCCGCCT GACGCTTCCC GGCTACCCGC ACCACGTGAT CCACCGGGGC AACAACCGGC AGTCGGTCTT CGTGGACCGG CAGGACCGCG AAATGCTACT GGAATCGCTC GCCGACCAGG CGCGTGCCTT CGACGTGGCG GTCCACGCCT ACGTGCTGAT GGACAACCAC TTCCATCTCC TGGCCACGCC GCGCACGGCC GAGGGCCTGC CGCTGCTGAT GCAGGCCGTC GGCCGCCGCT ACGTGCGCGC CTTCAACCAG CGCCACGGGC GCACGGGAAC GTTGTGGGAA GGTCGCTACC GTTCCACCGT GCTCGATCCC GCACGCTACC TGCTGGCCTG CATGGCCTAT ATCGACCTGA ACCCGGTGCG CGCCGGCCTG GTGGCCGATC CCGCGGAGTA CCCCTGGTCC AGCCATGCGC ATGCTCTGGG CCTGCGGCCC GACCGGCTGG TGACGCCGCA CGCGCTCTAC TGGGCCTTGG GGAACACCCC GTTCGCGCGC GAGGCTGCCT ATGGCGCGCT GGTGCAGGCG GGGCTCTCCG AGCAGGACCG CCGCCGCATT ACCGATGCGA CGCTGTCGGG ATGGGCGCTC GGCGATGCGG AATTCGCCGC AGCGCTGCAG TCCCAGACGG CGCGGCGGGT GGTGAAGGCG CAGGCAGGGC GTCCGCGCAA ACGTATCGTG CCTCCCGAGG ACTGA
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Protein sequence | MARLPRLTLP GYPHHVIHRG NNRQSVFVDR QDREMLLESL ADQARAFDVA VHAYVLMDNH FHLLATPRTA EGLPLLMQAV GRRYVRAFNQ RHGRTGTLWE GRYRSTVLDP ARYLLACMAY IDLNPVRAGL VADPAEYPWS SHAHALGLRP DRLVTPHALY WALGNTPFAR EAAYGALVQA GLSEQDRRRI TDATLSGWAL GDAEFAAALQ SQTARRVVKA QAGRPRKRIV PPED
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