Gene Aave_1007 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_1007 
Symbol 
ID4667280 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp1104875 
End bp1105579 
Gene Length705 bp 
Protein Length234 aa 
Translation table11 
GC content70% 
IMG OID639822207 
Producthypothetical protein 
Protein accessionYP_969379 
Protein GI120609701 
COG category[L] Replication, recombination and repair 
COG ID[COG1943] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.849512 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCCGCC TTCCCCGCCT GACGCTTCCC GGCTACCCGC ACCACGTGAT CCACCGGGGC 
AACAACCGGC AGTCGGTCTT CGTGGACCGG CAGGACCGCG AAATGCTACT GGAATCGCTC
GCCGACCAGG CGCGTGCCTT CGACGTGGCG GTCCACGCCT ACGTGCTGAT GGACAACCAC
TTCCATCTCC TGGCCACGCC GCGCACGGCC GAGGGCCTGC CGCTGCTGAT GCAGGCCGTC
GGCCGCCGCT ACGTGCGCGC CTTCAACCAG CGCCACGGGC GCACGGGAAC GTTGTGGGAA
GGTCGCTACC GTTCCACCGT GCTCGATCCC GCACGCTACC TGCTGGCCTG CATGGCCTAT
ATCGACCTGA ACCCGGTGCG CGCCGGCCTG GTGGCCGATC CCGCGGAGTA CCCCTGGTCC
AGCCATGCGC ATGCTCTGGG CCTGCGGCCC GACCGGCTGG TGACGCCGCA CGCGCTCTAC
TGGGCCTTGG GGAACACCCC GTTCGCGCGC GAGGCTGCCT ATGGCGCGCT GGTGCAGGCG
GGGCTCTCCG AGCAGGACCG CCGCCGCATT ACCGATGCGA CGCTGTCGGG ATGGGCGCTC
GGCGATGCGG AATTCGCCGC AGCGCTGCAG TCCCAGACGG CGCGGCGGGT GGTGAAGGCG
CAGGCAGGGC GTCCGCGCAA ACGTATCGTG CCTCCCGAGG ACTGA
 
Protein sequence
MARLPRLTLP GYPHHVIHRG NNRQSVFVDR QDREMLLESL ADQARAFDVA VHAYVLMDNH 
FHLLATPRTA EGLPLLMQAV GRRYVRAFNQ RHGRTGTLWE GRYRSTVLDP ARYLLACMAY
IDLNPVRAGL VADPAEYPWS SHAHALGLRP DRLVTPHALY WALGNTPFAR EAAYGALVQA
GLSEQDRRRI TDATLSGWAL GDAEFAAALQ SQTARRVVKA QAGRPRKRIV PPED