Gene Aave_0984 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_0984 
Symbol 
ID4665869 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp1079750 
End bp1080478 
Gene Length729 bp 
Protein Length242 aa 
Translation table11 
GC content69% 
IMG OID639822184 
Productcytochrome c, class I 
Protein accessionYP_969356 
Protein GI120609678 
COG category[C] Energy production and conversion 
COG ID[COG2863] Cytochrome c553 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.336073 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGGGTTA GCAGGGAGAC GCCCGCGAAG TGCCGCATTG TAAGATTGAC GGGCTTTGCG 
GCCCCCCTTC TACAACACAG AACCCCCGAT ATGAAGAAAC TGCTTGCTCC CATGCTGATG
GCTGCCGCGC TGGCGGTGGC CGCCTTCCCG GCCTCGGCCC AGGCACCCGC GGCGGGACAG
AAGGCGGGCA AGCCGGACCT GGTCAAGGGC GAGGCCGGCT TCGCCACGGT GTGCGCGGCC
TGCCATGCGG CCGACGGCAA CTCCACCATC GTGGCCAACC CCAAGCTGGC GCAGCAGCAC
CCCGAATACC TCGTCAAGCA GCTGCAGGAG TTCAAGTCCG GCAAGCGCAG CGACCCGGTG
ATGCAGGGCA TCGCCGCCAC GTTGTCGGAA GACGACATGC GCAACATCGC CTGGTGGGCG
GCCGGCAAGC AGGCCAAGCC CGGCTTCGCC AAGGACAAGG ACCTCGTCGC GCTGGGCGAG
CGCATCTACC GTGGCGGCAT CGCCGACCGC AACATCGCCG CCTGCGCGGG CTGCCACAGC
CCCAACGGAG CCGGCATCCC GGCCCAGTAC CCGCGCCTGT CGGGCCAGCA TGCCGACTAC
ACGGCCAAGC AGCTGGCCGC GTTCCGCGAC GGCAAGCGCG CCAACAGCGT GCAGATGACC
CAGGTCGCCG CCAAGCTCAA CGACCGCGAG ATCCGCGCCG TGGCGGACTA CATCGCCGGC
CTGCGCTGA
 
Protein sequence
MGVSRETPAK CRIVRLTGFA APLLQHRTPD MKKLLAPMLM AAALAVAAFP ASAQAPAAGQ 
KAGKPDLVKG EAGFATVCAA CHAADGNSTI VANPKLAQQH PEYLVKQLQE FKSGKRSDPV
MQGIAATLSE DDMRNIAWWA AGKQAKPGFA KDKDLVALGE RIYRGGIADR NIAACAGCHS
PNGAGIPAQY PRLSGQHADY TAKQLAAFRD GKRANSVQMT QVAAKLNDRE IRAVADYIAG
LR