| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_0965 |
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| Symbol | |
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| ID | 4665842 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax citrulli AAC00-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008752 |
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| Strand | - |
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| Start bp | 1056023 |
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| End bp | 1059277 |
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| Gene Length | 3255 bp |
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| Protein Length | 1084 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 639822165 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_969337 |
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| Protein GI | 120609659 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1807] 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCCGCT CGGGGATCAG GAAGGCAGGG GGGAGGAAGC GCGCGCCTGG GGCGTGCGGT
GGAAGCGGCC AGCCCGGCGG CGGCCCGCGG AGAACGCCGG AACGGCGGCA CGCCCGCGGA
TGCGGGGCGG CAGGAAAGGC GAAGGGGTCA TCGTGGTCCT CGCTCGTGGT GGCGGATGCA
TGGCCCGCCG GTGTGGCTTG CAATTTACCA ACCAGTAAAA ACTTACCTAT TGGTAAAATC
CCGGACAGCA AGCGCCGTGC CAGCCGCCAG TGCCGCGCCC TGGCGCGAAT CCCTCCCGTA
CCGGACCACA ATGGTGCGCA TGAGCCCCCG AAGACCGCCG TCCCGCCCTG CCCCTGTGCA
CGCCCGCACC ACCGAAGCCC CCCGCCGCCC GGCCGCGCCG CCGGCAGGCC CTGCAGCCTC
TTCCGAAACA GCTCCAGCGC CGGACTCCGC TACGGTCCCC GCCCCTGCGC CCCGCCCCGC
CACCGATGCG GCCCGCGCGC CCTCGCCCGC GCGGCTGCGC AAAGAGCAGG CCATCCTCGC
CGAGGCCGAG AGCCACTTCG CCCAGTTCGG CTTCGAAGGG GCCTCGCTCG ACAGCATCGC
TGCCGCCGCC GGCATCAGCC GGCACAACCT GCTCTACTAT TTCCCGAACA AGGAAGCGCT
CTACCGGCGT GTGCTGGACG ACGTGCTCAC CCAGTGGCTG GACGGCATGG AGGAGATGTC
GCACGGCGAA GACCCCTCCG AAGCCCTGCG CCGCTATATC CGGGCCAAGC TCCGGTCGTC
GCTGGAACGC CCGAACGCCG CCAAGGTGTT CGCCAAGGAG GTCATCGCCG GCGCGCCGCG
GTACGGCGAC GTCATCGCCG AACGCGTGGG CCCCGTGCTG CGCAACGACG TGCGCACCTT
CGAGCGCTGG GCGCGGGAAG GCCGCATCGC CCGCGTGAAC TTCACGCACC TGATGTTCAT
CATCTGGTCG GTCACCCAGG CGTATGCCGA CCAGCAGGCG CAGTTCGCCC TGCTGCTGGG
CAAGCCGGCC CTGACCGAGC GGGACTACGC GCATGCCGAG GCGCTGATCT GCCACATGGT
GCTCGCGGGC CTGGCGCCGG ACAGCGCCCC GCCCGCCTGA GGCGCGCCCG CAGGGCGGGG
AGCGCCCCAC GGCAGCGCTC CCCGCCCCAT CGCTTAGACT TCCGCGTCCC GCGGTTGCAC
GGTGCGCCCG CACGCCCTGC GCCGTCCGTC TTCCGCCGTC ACGCACTCAC CGCCATGGCC
ACCAAACCAT CCGTTTCCCT CATCGTCTTC GGTATCGCCG TCGTGGCGGC CGTCCTGGCC
ATCTACCTGC CCGGCTGGGA CCACGCGCTG CTGTTCGACG ATCTGGCCCT GACCGACGGC
ACCATCTTCG GCAGCTACGG GAACCTGCTC GCCTTCAAGC AGCGCCTGCT GTCCTACGGC
AGCTTCGTCT GGGTGGACGG CCTGGCCGGC GCCGGATGGT GGAAGCAGCG CCTCGTGAAC
ATCGCCCTGC ACCTGGGCAC CGTGGCGGCA CTCTATGCCC TCGTGCGCGA CCTGCTCACG
CACACACGCT TCCCCGAGGA ATTCGAGGCC CAGCCGCATT TCGGCGCATC GCGGCTTGCC
GCCGTGCGCG TGGGCGTGGC GCTCTTCGCG GTCAACCCCA TGGCGGTGTA CGCGGTGGCC
TACCTCGTGC AGCGCTCCAT CGTCATGGCC ACGTTCTTCG CAGTGCTGGC GTGCTGGTGC
TTCGTGCGCG GCCTGTCGGG CCGCGGGGCC GCCTGGTATG CCGGCGCCGT CGTGGCCTAT
GCGGCGGCGG TGCTGTCGAA GGAGCATGCG GTGATGGTGG CGGCCATGGC GGTGCCTCTG
TACATCCATG TCAAGCGGCC GGCGTGGCGC ACCGTGGCTG CCGTCGCGGG CGTTGCCGCC
TTGCTGGTCG CGGTGGCGGC GGCTGTCCTG TTCAGCTTTT ATGGCGACCT CATCGGCAAG
GTGTTCGACC AGCGCTCGAT CGATCTCACG CGGCAGCTGG AACTCCTCAG CCCCGGGATC
ACCCAGCGCA TGTACCCGCT CAGCATCCTG AACGAGGCCG CCCTGTTCTT CGCCTACGGT
CTCCTGTGGT TCGTTCCCAA CGTGATGTGG ATGTCGGTGG ACCTGCACCC CGCCTTCCCT
CTCTCGTTCA CCGCGTTCCC GCAGGTGCTG GGCCTGCTGG GCTATGTGGC CCTGTGGGTC
GTGGCGGTAT GGGCCGTGCT GCGCCGCCGC GGCGCCCTCA GCCTCGCGGG CGTTGCCCTG
CTGTTCCCCC TGGTGCTGTA TTTCACCGAA TTCGCCACGG TCTGGGTGCA GGATCCGTTC
GTCCTCTACC GAAGCTACCT CTGGGCTGTC GCGGTCCCCA TCCTGATCGC CATCGTGCTC
ACCGGCTTCA AGCCCCGCGC CGTCTACATG CTGGGCGCGA TCGTGGGCCT GGTGTTCGCC
CTGCTGGCCT TCGAGCGCTC CGCCTCCCTG CGTGACGATT ACACCGCCTG GACCGATGCT
GCCGAGAAGA CCGACCTCAA GGCTCCCGCA AGCGCGGTAG GCCGCTGGCG CCCCTTCCTC
AACCTGGGGG CCTACCACTT GGAACGCGGT TCCATGGCCG AAGCGCAGAG GGCATTCGCC
ACGGCCGAGG CACTGGGTGC CCTGCGCGGT ACCGCGCGCT TCAACCTCGG TGCGGCACTG
CAGCGCCAGA ACAAGCATGC GGAAGCCATC GCGGCATTCG ATGAGGCGGA AAAACAGGGC
TACAAGGACT CCCAGCTCTA CTACCAGCGT GGCGAATCCC AGTTCGCGCT GGGATTGTTC
GCTGCAGCGT ATGACAGCTT CAACACCGGC ATGGCCCAGG CGGGCGAAGG CGTGAGCGGC
AAGGACATGG ACCGCATCCG CGAAGCGATG CTGCTGCGCC GGGCCGAATC CGCCATCGGG
GCGAACCGGT TCGACGATGC GTTGCGCGAT TTCGCGACGC TGCAAAAGAT GAACCCCCAG
AGCCAGCGCG TCGCGCTGGG CACGGGCATG GCGCAGGTCG GCAAGGGAGA CGTCCAGGCA
GCCATCGCCA CCTTCAACCA GATCCTGGCA CGGACACCGA ATGCCGCAGT GGCCTATTAC
GGTCGTGCCA TGGCCTATCG CGCCGCCGGC AAGCTGGACG ACAGCCTGAA GGATCTGGAC
CGGGCCATCG CCCTGGACCC GCGCAATCCG CAGTACCCGC AAGTGCGCGC GCAGATCGCC
GCCGCCAGGA AGTAG
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| Protein sequence | MSRSGIRKAG GRKRAPGACG GSGQPGGGPR RTPERRHARG CGAAGKAKGS SWSSLVVADA
WPAGVACNLP TSKNLPIGKI PDSKRRASRQ CRALARIPPV PDHNGAHEPP KTAVPPCPCA
RPHHRSPPPP GRAAGRPCSL FRNSSSAGLR YGPRPCAPPR HRCGPRALAR AAAQRAGHPR
RGREPLRPVR LRRGLARQHR CRRRHQPAQP ALLFPEQGSA LPACAGRRAH PVAGRHGGDV
ARRRPLRSPA PLYPGQAPVV AGTPERRQGV RQGGHRRRAA VRRRHRRTRG PRAAQRRAHL
RALGAGRPHR PRELHAPDVH HLVGHPGVCR PAGAVRPAAG QAGPDRAGLR ACRGADLPHG
ARGPGAGQRP ARLRRARRAG SAPRQRSPPH RLDFRVPRLH GAPARPAPSV FRRHALTAMA
TKPSVSLIVF GIAVVAAVLA IYLPGWDHAL LFDDLALTDG TIFGSYGNLL AFKQRLLSYG
SFVWVDGLAG AGWWKQRLVN IALHLGTVAA LYALVRDLLT HTRFPEEFEA QPHFGASRLA
AVRVGVALFA VNPMAVYAVA YLVQRSIVMA TFFAVLACWC FVRGLSGRGA AWYAGAVVAY
AAAVLSKEHA VMVAAMAVPL YIHVKRPAWR TVAAVAGVAA LLVAVAAAVL FSFYGDLIGK
VFDQRSIDLT RQLELLSPGI TQRMYPLSIL NEAALFFAYG LLWFVPNVMW MSVDLHPAFP
LSFTAFPQVL GLLGYVALWV VAVWAVLRRR GALSLAGVAL LFPLVLYFTE FATVWVQDPF
VLYRSYLWAV AVPILIAIVL TGFKPRAVYM LGAIVGLVFA LLAFERSASL RDDYTAWTDA
AEKTDLKAPA SAVGRWRPFL NLGAYHLERG SMAEAQRAFA TAEALGALRG TARFNLGAAL
QRQNKHAEAI AAFDEAEKQG YKDSQLYYQR GESQFALGLF AAAYDSFNTG MAQAGEGVSG
KDMDRIREAM LLRRAESAIG ANRFDDALRD FATLQKMNPQ SQRVALGTGM AQVGKGDVQA
AIATFNQILA RTPNAAVAYY GRAMAYRAAG KLDDSLKDLD RAIALDPRNP QYPQVRAQIA
AARK
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