| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_0872 |
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| Symbol | |
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| ID | 4667674 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax citrulli AAC00-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008752 |
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| Strand | - |
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| Start bp | 947668 |
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| End bp | 949083 |
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| Gene Length | 1416 bp |
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| Protein Length | 471 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 639822071 |
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| Product | two component, sigma54 specific, Fis family transcriptional regulator |
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| Protein accession | YP_969244 |
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| Protein GI | 120609566 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.0650247 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCGCCA CGCCCCCGAC GAAAACCTCC GCGCCCCGTC CACGCATCCT CGTGGTGGAC
GACGATGCCG ACATGCTGCG GCTGCTGTCG CTGCGACTCA ACGCGGCCGG CTACGAAATC
ACGGCCGTCC CCTCCGCCGA AGCCGCGCTC GCCCAGCTGG AAACCAGCCG CCCGCAGCTC
GTGCTGAGCG ACGTGCGCCT GCCCGGCCGC GACGGCCTGG CCCTGTTCGA CGAGGTGCGC
TCGCGCCATC CTTCGCTGCC CGTGATCCTG CTCACCGCGC ACGGCACCAT CCCCGACGCG
GTCGAGGCCA CGGCGCGCGG CGTGTTCACC TACCTCACCA AGCCCTACGA CGCCAAGGAC
CTGCTCGACA AGATCGCGCA GGCCCTGGCG CTGAGCGCGC CCGCCACGCA GACGCCCCAG
GCCGACAGCA CCTGGCGCGC CGAGATCGTG AGCCGCTCCA ACCGCATGGC CGACCTGCTC
GCCGAGGCCC GCATGGTGGC CCAGTCGGAC GCCAGCGTGC TGCTGCTGGG CGACAGCGGC
ACCGGCAAGG AACTGCTGGC GCGCGCCATC CACCGGGCCA GCCCGCGCGC GGCGCGGCCC
TTCGTGGCCG TCAATTGCGG CGCCATCCCC GAGGCCCTGC TGGAGTCCGA ACTGTTCGGC
CACATGAAGG GCGCCTTCAC CGACGCGCAC AGCAACCACA AGGGCCTGTT CCAGGCGGCC
GACGGCGGCA CGCTGCTGCT CGACGAAATC GGCGACATGC CGCCCGCGCT GCAGGTCAAG
CTGCTGCGCG TGCTGCAGGA GCGCGCCGTG CGCCCCGTCG GCGCGAGCCA GGCCACGCCG
GTGAACGTGC GCATCGTCTC CGCCACGCAC CGCGACCTGG AGGCCGCCAT GGCCACGGGC
CAGTTCCGCG AGGACCTCTA CTACCGCCTC AACGTGGTCA CGCTGACGCT GCCCACCCTG
GCCGACCGCC GCGAGGACAT CCCGCTACTG GCCAACCATT TCCTCGACCA GCTGGCGCGC
AAGTACGACA AGCGCCTGTC GGGCTTTTCG CCGGAAGCGC TCAAGGCGCT CACGGCGGCG
CCCTGGCCAG GCAACGTGCG GCAGCTCTAC AACGTGGTGG AGCAGGCCTG CGCGCTCTCC
ACCACGCCCC TGGTACCGCT GGGCCTCGTG CAGCGCGCGC TGCGCACGCC CACCGTGCAG
GTGCTGAGCT TCACCGAGGC GCGCCAGCGC TTCGAGCGCG AATACCTGGT GGACCTGCTG
AAGATGACCG ACGGCAACGT CGCCGATGCC GCGCGGCTGG CGCAGCGCAA CCGTACGGAG
TTCTACCGCC TGCTGCAGAA GCACGCGCTG ACGCCGGGCC AGTTCAAGAG CGACGGGGCC
CCGCCGGACG ATGTCGCCGA AGAGCGACAA CAATAA
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| Protein sequence | MPATPPTKTS APRPRILVVD DDADMLRLLS LRLNAAGYEI TAVPSAEAAL AQLETSRPQL
VLSDVRLPGR DGLALFDEVR SRHPSLPVIL LTAHGTIPDA VEATARGVFT YLTKPYDAKD
LLDKIAQALA LSAPATQTPQ ADSTWRAEIV SRSNRMADLL AEARMVAQSD ASVLLLGDSG
TGKELLARAI HRASPRAARP FVAVNCGAIP EALLESELFG HMKGAFTDAH SNHKGLFQAA
DGGTLLLDEI GDMPPALQVK LLRVLQERAV RPVGASQATP VNVRIVSATH RDLEAAMATG
QFREDLYYRL NVVTLTLPTL ADRREDIPLL ANHFLDQLAR KYDKRLSGFS PEALKALTAA
PWPGNVRQLY NVVEQACALS TTPLVPLGLV QRALRTPTVQ VLSFTEARQR FEREYLVDLL
KMTDGNVADA ARLAQRNRTE FYRLLQKHAL TPGQFKSDGA PPDDVAEERQ Q
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