| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_0829 |
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| Symbol | |
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| ID | 4668142 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax citrulli AAC00-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008752 |
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| Strand | + |
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| Start bp | 898143 |
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| End bp | 899996 |
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| Gene Length | 1854 bp |
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| Protein Length | 617 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 639822028 |
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| Product | thiamine biosynthesis protein ThiC |
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| Protein accession | YP_969201 |
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| Protein GI | 120609523 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0422] Thiamine biosynthesis protein ThiC |
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| TIGRFAM ID | [TIGR00190] thiamine biosynthesis protein ThiC |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.510545 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.639262 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGCCC CCGACAAGTT CGCCCAGCTG CTCGCGCTGA CCCGCGAACC CTTCCCCGCC
TCCACCAAGA ACTACCTCAT CGGCAGCCGC CCCGACGTGC GCGTGCCCGT GCGAGATATC
GCGCTCACCA ACGGCGAGCA GGTCAGCGTG TACGACACCT CAGGCCCCTA CACCGACCCG
GCTGCCGAGA TCGACGTGCG CCGGGGCCTG CCCAGCGTGC GTGGCGCGTG GATCGAGGGC
CGGGGCGACA CCGAGCGCTA CGAAGGCCGC CAGCGGGTGG CGCTGGACGA CGGCAGCAAG
TCGGAAGACG CCGCCCGCCT GGCCCAGCTG CGCGCCGAGG CCGCCGCGCT GCAGCGCGCG
CCCCTGCGCG CGAAGAGCGG CGCCAGCCAC ACCGGCAATG TCACGCAGAT GCACTACGCG
AAGAAGGGCA TCGTCACGCC CGAGATGGAG TACGTGGCCC TGCGCGAGAA CGGCCGCCGC
GAATGGATGG CGCAGTATCA GCAGGACGCG GCGCGCGAGC AGCGCCTGGC CGGCAACCCG
ATGGGCGCGA GCATCCCGAA GATCATCACG CCCGAATTCG TGCGCGACGA AGTGGCGCGG
GGCCGGGCCA TCATCCCGGC CAACATCAAC CACCCCGAGG TCGAGCCCAT GGCCATCGGG
CGCACCTTCA AGGTGAAGAT CAACGCAAAC ATCGGCAATT CGGCCGTCAC CTCCAGCATC
GAGGAAGAGG TGGAAAAGCT GGTCTGGGCG ATCCGCTGGG GCGCGGACAA CGTGATGGAC
CTCTCCACCG GCAAGAACAT CCACACCACG CGCGACTGGA TCGTGCGCAA CAGCCCCGTG
CCCATCGGCA CCGTGCCCAT CTACCAGGCG CTGGAGAAGG TGGGGGGCAT CGCCGAGGAC
CTGACCTGGG AGATCTTCCG CGACACGCTC GTCGAGCAGG CCGAGCAGGG CGTGGACTAC
TTCACCATCC ATGCGGGCGT GCGGCTGGCC TTCATCCACC TGACTGCGCA GCGGCGCACG
GGCATCGTCT CGCGCGGCGG CTCCATCATG GCCAAGTGGT GCATGGCCCA CCACCGCGAG
AGCTTCCTCT ACGAGCACTT CGAGGACATC TGCGACATCA TGAAGCAGTA CGACGTCAGT
TTCAGCCTGG GCGACGGCCT GCGGCCCGGC TGCGCGTCCG ATGCCAACGA CGAGGCGCAG
TTCGCCGAAC TGCGCACGCT GGGCGAATTG ACGCGGACCG CCTGGAAGCA CGACGTGCAG
ACCATGATCG AGGGCCCCGG CCACGTGCCC ATGCACATGA TCCAGGCCAA CATGACCGAG
CAGCTCAGGA CCTGCCATGA AGCACCGTTC TACACGCTCG GGCCGCTGAC CATCGACATC
GCCCCCGGCT ACGACCACAT CGCCAGCGCC ATCGGCGCGG CCATGATCGG CTGGATGGGC
ACGGCCATGC TCTGCTACGT GACGCCCAAG GAGCACCTGG GCCTGCCCGA CCGCGACGAC
GTGAAGCAGG GGATCATCGC GTACAAGATC GCGGCCCATG CGGCCGACGT GGCCAAGGGC
CATCCGGGGG CCCGCGCGCG CGACGACGCG CTCAGCCAGG CGCGCTTCGA CTTCCGCTGG
CAGGACCAGT TCAACCTGGG CCTGGACCCG GAAACCGCGC AGCAGTACCA CGACGAGACC
CTGCCCAAGG ATTCGGCCAA GGTGGCGCAC TTCTGCTCGA TGTGCGGCCC GAAGTTCTGC
TCGATGAAGA TCACGCAGGA AGTGCGCGAA TTCGCGGCGC AGGGCATGCA GGAGAAAGCC
CGGGAGTTCC GCGGCACGGG CGGGGAACTG TACGTGCCGA TCCAGCCGGC ATGA
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| Protein sequence | MNAPDKFAQL LALTREPFPA STKNYLIGSR PDVRVPVRDI ALTNGEQVSV YDTSGPYTDP
AAEIDVRRGL PSVRGAWIEG RGDTERYEGR QRVALDDGSK SEDAARLAQL RAEAAALQRA
PLRAKSGASH TGNVTQMHYA KKGIVTPEME YVALRENGRR EWMAQYQQDA AREQRLAGNP
MGASIPKIIT PEFVRDEVAR GRAIIPANIN HPEVEPMAIG RTFKVKINAN IGNSAVTSSI
EEEVEKLVWA IRWGADNVMD LSTGKNIHTT RDWIVRNSPV PIGTVPIYQA LEKVGGIAED
LTWEIFRDTL VEQAEQGVDY FTIHAGVRLA FIHLTAQRRT GIVSRGGSIM AKWCMAHHRE
SFLYEHFEDI CDIMKQYDVS FSLGDGLRPG CASDANDEAQ FAELRTLGEL TRTAWKHDVQ
TMIEGPGHVP MHMIQANMTE QLRTCHEAPF YTLGPLTIDI APGYDHIASA IGAAMIGWMG
TAMLCYVTPK EHLGLPDRDD VKQGIIAYKI AAHAADVAKG HPGARARDDA LSQARFDFRW
QDQFNLGLDP ETAQQYHDET LPKDSAKVAH FCSMCGPKFC SMKITQEVRE FAAQGMQEKA
REFRGTGGEL YVPIQPA
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