Gene Aave_0822 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_0822 
SymbolmurC 
ID4668633 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp890439 
End bp891866 
Gene Length1428 bp 
Protein Length475 aa 
Translation table11 
GC content71% 
IMG OID639822021 
ProductUDP-N-acetylmuramate--L-alanine ligase 
Protein accessionYP_969194 
Protein GI120609516 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0773] UDP-N-acetylmuramate-alanine ligase 
TIGRFAM ID[TIGR01082] UDP-N-acetylmuramate--alanine ligase 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.921504 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCACG CCATCCGCCA CATCCATTTC GTGGGACTCG GGGGCGCCGG CATGTGCGGC 
ATCGCCGAAG TGCTGTTCAA CCTGGGCTAC GAGATCTCGG GCTCCGACCT CGCCGACAGC
GCCACGCTGC GCCGCCTGGC CGCGCTGGGC ATCGCCACCC GCGTGGGCCA TGCGGCCGCG
CACATCGAGG GCGCCGACGC GGTGGTCACC TCCACCGCCG TGCAGTCCGA CAACCCCGAG
GTGATCGCCG CGCGCGAACG CAAGATTCCC GTGGTGCCGC GCGCCCTGAT GCTGGCGGAG
CTGATGCGCC TCAAGCGCGG CATCGCGATC GCCGGCACCC ACGGCAAGAC CACCACCACC
AGCCTCGTGA CCAGCGTGCT CGCGGAAGCG GGGCTGGACC CGACCTTCGT GATCGGCGGG
CGCCTCAACA GCGCGGGCGC GAACGCCAAG CTGGGGCAGG GCGAGTACAT CGTGGTGGAG
GCCGACGAAT CCGATGCGTC CTTCCTCAAC CTGCTGCCCG TGATGGCGGT GGTGACGAAC
ATCGACGCCG ACCACATGGA AACCTACGGC CACGACTTCG GCCGGCTGAA GTCGGCCTTC
GTGGACTTCC TGCACCGCAT GCCGTTCTAC GGCACGGCCA TCCTCTGCAC CGACAACCCC
GCCATCCGCG AGATCCTGCC CGACGTGACC TGCCCGGTCA CGAGCTACGG CTTCTCCGAG
GATGCCCAGG TGCGCGCGGT GGACGTGCGC GCCGACGCGG GCCGCATGCG CTTCCGCGTG
CAGCGCCGCA ACGGCGTGAC GCTGCCCGAC CTCGACGTGG TGCTGAACCT CGCCGGCGAG
CACAACGTGC TCAACGCGCT GTCGGCGATC GCCGTGGCGG TGGAACTGAA CATTCCCGAC
GAGGCGCTGC TGCGTGCGCT CGCGCAGTTC AAGGGCGTGG GCCGGCGCTT CCAGCGCTAC
GGCGAGCTGC CCGCGCAGGG CGGCGGCACC TTCACCCTGA TCGAGGACTA CGGCCACCAT
CCCGTGGAAA TGACGGCCAC GCTCGCCGCG GCGCGCGGCG CGTTCCCGGG CCGCCGCCTC
GTGCTGGCCT TCCAGCCGCA CCGCTACAGC CGCACACGCG ACTGTTTCGA GGACTTCGTG
AAGGTGATGG GCAGCGCCGA CGCCGTGCTG CTCACCGAGG TCTATGCGGC CGGCGAGGCG
CCCATCGTGG CGGCCGACGG CCGTTCGCTC GCCCGCGCGG TGCGCGTGGC CGGGCAGGTG
GAGCCCGTCT TCGTGGACGA CATCGGCGAG CTGCCGCGGC GCATCGCGGA CAACGCGCGC
GGCGGCGACG TGGTGCTGTG CATGGGGGCC GGCTCGATCG GCGCCGTGCC CGCGAAGGTG
GTGGAGATGC TGCGCACGGA CGTGCCGGCG ATGCAGGAGG ATCGGTGA
 
Protein sequence
MKHAIRHIHF VGLGGAGMCG IAEVLFNLGY EISGSDLADS ATLRRLAALG IATRVGHAAA 
HIEGADAVVT STAVQSDNPE VIAARERKIP VVPRALMLAE LMRLKRGIAI AGTHGKTTTT
SLVTSVLAEA GLDPTFVIGG RLNSAGANAK LGQGEYIVVE ADESDASFLN LLPVMAVVTN
IDADHMETYG HDFGRLKSAF VDFLHRMPFY GTAILCTDNP AIREILPDVT CPVTSYGFSE
DAQVRAVDVR ADAGRMRFRV QRRNGVTLPD LDVVLNLAGE HNVLNALSAI AVAVELNIPD
EALLRALAQF KGVGRRFQRY GELPAQGGGT FTLIEDYGHH PVEMTATLAA ARGAFPGRRL
VLAFQPHRYS RTRDCFEDFV KVMGSADAVL LTEVYAAGEA PIVAADGRSL ARAVRVAGQV
EPVFVDDIGE LPRRIADNAR GGDVVLCMGA GSIGAVPAKV VEMLRTDVPA MQEDR