Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Aave_0762 |
Symbol | |
ID | 4669661 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax citrulli AAC00-1 |
Kingdom | Bacteria |
Replicon accession | NC_008752 |
Strand | + |
Start bp | 816893 |
End bp | 818575 |
Gene Length | 1683 bp |
Protein Length | 560 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 639821961 |
Product | protein of unknown function DUF894, DitE |
Protein accession | YP_969134 |
Protein GI | 120609456 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.446257 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGCTGATC ACAACAACCA TCCCCCGACC AAGGCACCCG GCAGCTTCGC GCCGCTCGCC ATTCCCGTCT TCGCCGTGCT GTGGGCCGCC ACGGTGCTGG GCAACATCGG CAGCTTCATG CGCGACGTGG CCAGCGCCTG GATGGTGACG GAGCTGTCCT CCAGCCCCGC GGCCGTGGCG CTGATCCAGA CGGCGGCCAC GCTGCCCGTC TTCCTGCTGG CGATTCCCGC GGGCGTGCTG TCGGACATCC TGGACCGCCG CCGCTTCCTG ATCGGCGTGC AGGTGCTGCT GGGCGCCGTC AGCGGCACGC TGCTGGTGCT GGCCCACACG CAGGCGCTGA CGGTGGAGTG GCTGGTGGCG CTCACCTTCG TGGGCGGCAT CGGCGCCGCG CTGATGGGCC CGACCTGGCA GTCCATCGTG CCCGAGCTGG TGCCGCGCAG CGAGCTCAAG AGCGCCGTGG CGCTGAATTC GCTGGGCATC AACATCGCCC GCGCCATCGG GCCGGCCGCC GGCGGCCTGC TGCTGGCGAG CTTCGGCGCC GCGGCCGCCT ACGGGCTCGA CGTGCTGAGC TATGTGTTCG TGATCGCCGC GCTGCTGTGG TGGAAGCGCC CGCAGGCCGA GGCCTCGGCG CTGAACGAGC AGTTCTTCGG CGCCTTCCGG GCCGGCGTGC GCTATGCCCG CGCCAGCCGC GAACTGCACG TGGTGCTGCT GCGCGCGGCG GTGTTCTTCC TGTTCGCCAG TTCGGTCTGG GCGCTGCTGC CGCTGGTGGC GCGCCGCATG CTGGGCGGCA CGGCCGGCTT CTACGGCGTG ATGCTGGGCG CCGTGGGCGC GGGCGCCATC CTGGGCGCGG TGCTGCTGCC GCGGCTGCGC AGGCGCCTGG ACACCGACGG GCTGGTGCTG CTGGCCTCGG CCGTCACGGC GGTGGTGATG GGCGTGCTGG CCCTGGCGCC ACCGCAGTGG GCCGCCGTGG CGCTGATGCT GGCGCTGGGC CTGGGCTGGA TCATCGCGCT GACCACGCTC AACGGCGTGG CCCAGGCGGT GCTGCCCAAC TGGGTGCGCG GCCGCGGGCT GGCCATCTAC CTGATGGTGT TCAACGGCGC CATGGCGCTG GGCAGCCTGG GCTGGGGCCT GGTGGCCGGC CAGCTGGGCC TGCCGGCCAC GCTGCTGGCC GGGGCGGGCG GGCTGGTGGC CGTGTCGCTG GTCTTCCACC GCGTCAAGCT GCCCACGGGC GAAGCCGACC TGCAGCCGTC CAACCACTGG CCCGAGCCGC TGCTGGCCGA GCCCGTGGCG CACGACCGCG GCCCGGTGAT GGTGCAGGTC GAGTACCGGG TGCGGCGGCA CGACCTGCCT GCCTTCCTGC AGGCCATGCG GCACGTGGCC CGCGAGCGCC GCCGCGACGG TGCCTATGCC TGGGGCGTGG CCGAGCACAC GGGGGAGCCG GGGCGGGTGA TCGAATGGTT CCTGGTCGAG TCCTGGGCGG AGCACCTGCG GCAGCACCGG CGCGTCTCGC GTGCCGATGC CGACCAGCAG GCCGAGGCAC GGCGCTTCCA CATCGGCCCG GAGGCCCCGG TGGTGCACCA CTTCCTGGCG CTGGATCCGC GCGATCCCGC AGCCTCCGTG CCGCGGGACC CGGACCCGGA CGGGCATGGC CACGGCCATG CCGGCAGCGG CGGGGTGGAC TGA
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Protein sequence | MADHNNHPPT KAPGSFAPLA IPVFAVLWAA TVLGNIGSFM RDVASAWMVT ELSSSPAAVA LIQTAATLPV FLLAIPAGVL SDILDRRRFL IGVQVLLGAV SGTLLVLAHT QALTVEWLVA LTFVGGIGAA LMGPTWQSIV PELVPRSELK SAVALNSLGI NIARAIGPAA GGLLLASFGA AAAYGLDVLS YVFVIAALLW WKRPQAEASA LNEQFFGAFR AGVRYARASR ELHVVLLRAA VFFLFASSVW ALLPLVARRM LGGTAGFYGV MLGAVGAGAI LGAVLLPRLR RRLDTDGLVL LASAVTAVVM GVLALAPPQW AAVALMLALG LGWIIALTTL NGVAQAVLPN WVRGRGLAIY LMVFNGAMAL GSLGWGLVAG QLGLPATLLA GAGGLVAVSL VFHRVKLPTG EADLQPSNHW PEPLLAEPVA HDRGPVMVQV EYRVRRHDLP AFLQAMRHVA RERRRDGAYA WGVAEHTGEP GRVIEWFLVE SWAEHLRQHR RVSRADADQQ AEARRFHIGP EAPVVHHFLA LDPRDPAASV PRDPDPDGHG HGHAGSGGVD
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