| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_0729 |
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| Symbol | |
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| ID | 4665332 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax citrulli AAC00-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008752 |
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| Strand | + |
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| Start bp | 782053 |
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| End bp | 784503 |
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| Gene Length | 2451 bp |
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| Protein Length | 816 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 639821930 |
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| Product | conjugal transfer ATPase TrbE |
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| Protein accession | YP_969103 |
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| Protein GI | 120609425 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3451] Type IV secretory pathway, VirB4 components |
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| TIGRFAM ID | [TIGR00929] type IV secretion/conjugal transfer ATPase, VirB4 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGAACC TTGCCGAATA CCACCAGCGG CCCGCGCTGC TGGCCGACTG GTTGCCCTGG
GCCGGGCTGA TCGCGCCGGG CGTGGTACTG AACAAGGATG GCTCGTTCCA GCGCACGGCA
CGTTTTCGTG GGCCGGATCT GGACAGCGCG ACGCAAGGCG AGCTGATCGC CACGTCGGCG
CGGCTCAACA ACGCGCTGCG TCGCCTGGGA TCGGGCTGGG CCTTGTTTAT CGAAGCTGAG
CGCCGCGCAG CGGCGGGCTA TCCACGTTCC GACTTCCCCG AACCGTTGTC CTGGCTGGTG
GAGGAAGAAC GCCGCGCGGC TTTCGAGGAA TCCGGCCATC ACTACGAGAG CGCCTATCAC
CTCACGCTGG CATATCTGCC ACCAGAAGAA TCCCGCGCCC GCGCTGCCAA GATGCTCTAT
GAGAACGCGC CGGGCGACGG TGTGGACTGG CAGGGTCGGC TGGAAGCCTT CGTGGCTGAA
ACGGATCGAG TGTTCGACCT GCTCGACGGC GTCAAGCCAG AGATTGCCTG GCTGGATGAC
GCGCAGACAC TGACCTACCT GCACGCCACG GTGTCCACGC GGCGCTACCG CGTCGGCGTG
CCCGACGTGC CATTCCACAT CGACGCGCTG CTGGCCGATT CCGCCCTGGT CGGTGGCCTG
GCTCCCATGC TGGGCGACCG GCATCTACGC GTGGTGTCGG TGCGAGGATT TCCGACCTCA
ACCTGGCCGG GGATTCTGGA CGACCTCAAC CGCTTGGGCT TCGGCTACCG CTGGAGCACG
CGCTTTTTGT GCCTGGACAA AGCCGAGGCG GAAAAAGAAC TGGGCCGTCT GCGCCGCCAG
TGGTTCGCCA AGCGCAAGAA CGTCGTCGCG CTGCTGCGCG AAACGATCTT CCAGCAGGAA
AGCCCGCTGG TCGATACCGA CGCCAACAAC AAAGCCGCCG ATGCGGATGC CGCCTTGCAG
GAGCTGGGCA GCGATCAAGT TGCCTTCGGC TACCTGACGG CCACCGTCGC CGTCATGGAT
GCCGATGCCG CCGTGGCCGA CGAGAAGCTG CGGATGGTGG AGCGCGTCAT CCAGGGGCGC
GGCTTCGTCA CCATCCCCGA AACCTTAAAC GCCGTGGATG CCTGGCTGTC GTCCATTCCC
GGCAACGCCT ATGCCAACGT GCGCCAGCCC ATCGTCTCGA CGCTGAATCT GGCGCACCTG
ATGCCGGTGT CTGCCGTTTG GGCCGGGCCG GAGAAGAACG CGCATCTGGA TGGCCCGCCG
CTGATCGTCA CCCGCACCGA TGGCGCGACG CCGTTCCGGC TGGTGACGCA TATCGGCGAC
GTGGGCCACA CGCTGGTTGC CGGGCCGACC GGCATGGGCA AGTCGGTCTT GCTCGCCACG
CTGGCAATGC AGTTTCGCCG CTATCCCGGC TCGCGCATCT TCGCCTTCGA CATGGGCCGC
TCGATGCGCG CCACCATCCT GGGGCTGGGC GGCGAGCATT ACGACCTCGG CAACGATGGG
GCGATCGCCT TCCAGCCACT GGCCCGCATC GACCAGGAGG GCTACCGCAC CTGGGCCGCT
GAGTGGGTGG AAGGTCGCCT GCTGCATGAA GGTGTTGCCA TCGGCCCGGA CGAGAAGGCC
GCGATCTGGT CAGCACTCGG CAGCCTCGCT GGTGCGCCGG TCGGGCAGCG CACGCTGACG
GGTCTGTCGG TGCTGTTGCA GTCGAACGCA CTGCGCCAGG CGCTCGCGCC CTATGTGCTG
GGTGGTGCCC ACGGCAAGCT GCTGGATGCC GATGCCGACC GCCTGGGTTC CGGCAGCGTG
CAGGGCTTCG AGATGGAAGA ACTGATGCAC AGCAAAGCGG CGGTGCTGGC CGTGCTGGGC
TACCTGTTCG CCCGCTTCGA TGAACGCTTC GACGGCGCGC CCACGCTGCT GATCCTCGAT
GAAGCCTGGT TGTTTCTCGA TGACCCGGTG TTCGCCGCCC GCATCCGCCA GTGGCTCAAG
ACACTGCGCA AGAAAAACGT CAGTGTCATC TTCGCCACGC AATCGTTGGC TGACATCAAG
GATTCGAGCA TTGCCCCGGC GGTGATCGAA AGCTGCGCGA GTCGCATTTT CCTCCCCAAT
CCGCAGGCCA CAGAGCCGCA TATCCGCACG ATCTACGAAG GCTTCGGGCT GAACGCGCGC
CAGATCGAGA TCGTGGCGAC CGCGCAGCCC AAGCGTGACT ACTACTACCA ATCGCGCATG
GGCAATCGTC TGTTCGACCT CGACCTGGGG CCAGCCACGT TGGCTTTCGC CGGGGCATCC
ACCCCACAAG ACCAACGCGA TATAGATCGC GTGCTGTTGG ACGCAGGCAC ACCGGGCTTC
GCCGGTGCGT GGCTGCGCCA TCGTGGCCTC GATTGGGCCG CTGATCTGCT GCCGTCCTCG
CCGGCGGCAG CTTCTTTCCT CGCTTCTCAA CGACCGGAGG TTTCACCATG A
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| Protein sequence | MLNLAEYHQR PALLADWLPW AGLIAPGVVL NKDGSFQRTA RFRGPDLDSA TQGELIATSA
RLNNALRRLG SGWALFIEAE RRAAAGYPRS DFPEPLSWLV EEERRAAFEE SGHHYESAYH
LTLAYLPPEE SRARAAKMLY ENAPGDGVDW QGRLEAFVAE TDRVFDLLDG VKPEIAWLDD
AQTLTYLHAT VSTRRYRVGV PDVPFHIDAL LADSALVGGL APMLGDRHLR VVSVRGFPTS
TWPGILDDLN RLGFGYRWST RFLCLDKAEA EKELGRLRRQ WFAKRKNVVA LLRETIFQQE
SPLVDTDANN KAADADAALQ ELGSDQVAFG YLTATVAVMD ADAAVADEKL RMVERVIQGR
GFVTIPETLN AVDAWLSSIP GNAYANVRQP IVSTLNLAHL MPVSAVWAGP EKNAHLDGPP
LIVTRTDGAT PFRLVTHIGD VGHTLVAGPT GMGKSVLLAT LAMQFRRYPG SRIFAFDMGR
SMRATILGLG GEHYDLGNDG AIAFQPLARI DQEGYRTWAA EWVEGRLLHE GVAIGPDEKA
AIWSALGSLA GAPVGQRTLT GLSVLLQSNA LRQALAPYVL GGAHGKLLDA DADRLGSGSV
QGFEMEELMH SKAAVLAVLG YLFARFDERF DGAPTLLILD EAWLFLDDPV FAARIRQWLK
TLRKKNVSVI FATQSLADIK DSSIAPAVIE SCASRIFLPN PQATEPHIRT IYEGFGLNAR
QIEIVATAQP KRDYYYQSRM GNRLFDLDLG PATLAFAGAS TPQDQRDIDR VLLDAGTPGF
AGAWLRHRGL DWAADLLPSS PAAASFLASQ RPEVSP
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