Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Aave_0706 |
Symbol | |
ID | 4665723 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax citrulli AAC00-1 |
Kingdom | Bacteria |
Replicon accession | NC_008752 |
Strand | + |
Start bp | 764199 |
End bp | 765056 |
Gene Length | 858 bp |
Protein Length | 285 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 639821908 |
Product | integrase catalytic subunit |
Protein accession | YP_969081 |
Protein GI | 120609403 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2801] Transposase and inactivated derivatives |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.760858 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTGCCGGG TGCTGGGCGT GTCCCACAGC GGCTTCTACG ACTGGCGGCA CCGAGCGCCA AGCCAGCGCG CGATGGAGGA CATGGTGCTC ACCGAGCGGA TCAGGCAGGT GCACGCCGAG TCCCGCGAGA CCTACGGCCA GCCACGCGTG CGGGCCGAGT TGGCCGCACA GGGCGTGCGC GTCGCAGGCA AGCGGATCGC CCGCCTCATG CGCCAGGCAG GCCTGCAGGG GATCAGCAAA CGACGGGCGA CCACGGTGAC CACGCGGCGT GACCCACGCG AGCGTCCAGC GGCGGACCTC GTGATGCGAC GCTTCCGCGC CGAGCGAGCG AACCAGCTGT GGGTGGCCGA CATGACCTAT GTGCCGACGT GGGCAGGCTT CGTCTACCTG GCGGTGGTGA TGGACGTCTT CAGCCGGCGC ATCGTCGGCT GGTCGATGGG AGAGCGCATG ACCGCGCAAC TCGTGCTGGC GGCGCTGAAC ATGGCATTGG CCCGACGCAA GCCCCAGGGT GTCATCCACC ACTCGGACCA GGGCAGCCAG TACACCAGCC TGGCGTTCGG GCAACGCTGC GCCGAGATGG GTGTGCGCCC GTCGATGGGC AGTGTGGGTG ACGCGTACGA CAACGCCATG GCCGAGAGCT TCTTCGCCAC GCTCGAATGC GAGCTGATCG AGCGGCGCAG CTTCCGATCG AAGGCGGAGG CGAAGGCCGC GGTGTTCAGC TACATCGAGG GCTGGTACAA CCCGCGCCGA CGCCACTCCG CGCTGAGCTA CCACTCACCC GTGGAGTTCG AGCGCCGCGT CGTCGCCGAG GCGTGTCAGG CAACGGAGAT CAACGAGAGA GACCAAATCC CGGCTTGA
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Protein sequence | MCRVLGVSHS GFYDWRHRAP SQRAMEDMVL TERIRQVHAE SRETYGQPRV RAELAAQGVR VAGKRIARLM RQAGLQGISK RRATTVTTRR DPRERPAADL VMRRFRAERA NQLWVADMTY VPTWAGFVYL AVVMDVFSRR IVGWSMGERM TAQLVLAALN MALARRKPQG VIHHSDQGSQ YTSLAFGQRC AEMGVRPSMG SVGDAYDNAM AESFFATLEC ELIERRSFRS KAEAKAAVFS YIEGWYNPRR RHSALSYHSP VEFERRVVAE ACQATEINER DQIPA
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