Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Aave_0637 |
Symbol | |
ID | 4667669 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax citrulli AAC00-1 |
Kingdom | Bacteria |
Replicon accession | NC_008752 |
Strand | - |
Start bp | 686971 |
End bp | 688014 |
Gene Length | 1044 bp |
Protein Length | 347 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 639821842 |
Product | twitching motility protein |
Protein accession | YP_969015 |
Protein GI | 120609337 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG2805] Tfp pilus assembly protein, pilus retraction ATPase PilT |
TIGRFAM ID | [TIGR01420] pilus retraction protein PilT |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGACATCA CCCAACTGCT CGCCTTCAGC GTGAAGAACA AGGCCTCCGA CCTGCACCTG TCCGCGGGCC TGCCTCCGAT GATCCGCGTG CATGGCGACG TGCGCCGCAT CAACGTCGAT GCCCTCGACC ACAAGACCGT GCACGCCATG GTGTACGACA TCATGAGCGA CGCCCAGCGC AAGGTGTACG AGGAGTTCCT GGAAGTGGAC TTCTCCTTCG AGATCGAGGG CCTGGCGCGC TTCCGGGTCA ACGCCTTCAA CCAGAACCGC GGCGCGGCCG CCGTGTTCCG GACCATCCCG AGCAAGATCC TCACGCTCGA GCAGCTCAAC GCCCCGCGCA TCTTCGCCGA CCTTGCCCTC AAGCCGCGCG GCCTCGTGCT CGTCACCGGC CCCACCGGCT CGGGCAAGTC CACCACGCTC GCGGCCATGG TGAACCACCT CAACGAGACC GAATACGGGC ACATCCTGAC GGTGGAAGAC CCGATCGAAT TCGTGCACGA CTCCAAGAAG TGCCTGATCA ACCAGCGCGA GGTCGGGCCG ATGACGCTGT CCTTCGCCGC CGCGCTGAAA TCCGCGCTGC GCGAAGATCC GGACGCCATC CTCGTGGGCG AAATGCGCGA CCTCGAAACC ATCCGCCTGG CCATGACCGC CGCCGAGACG GGCCACCTCG TGTTCGGCAC CCTGCACACT TCCAGCGCGG CCAAGACCAT CGACCGGATC ATCGACGTGT TCCCCGCCGA GGAAAAGGAA ATGGTGCGCG CCATGCTGTC CGAATCGCTG CAGGCCGTGA TCTCCCAGAC GCTGTGCAAG ACCAAGGACG GCCAGGGCCG GGTGGCGGCG CACGAGATCA TGCTGGGCAC GAGCGCCATC CGCAACCTGA TCCGCGAGGC CAAGGTGGCG CAGATGTACT CCACCATCCA GACCAGCAGC AGCGTCGGCA TGCAGACGCT GGACCAGAAC CTCACCGACC TCGTGCGGCG CAACATCATC AGCCCCGCGG AAGCCCGCGG CAAGGCCAAG ATTCCCGAGA ACTTCCCGGG CTGA
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Protein sequence | MDITQLLAFS VKNKASDLHL SAGLPPMIRV HGDVRRINVD ALDHKTVHAM VYDIMSDAQR KVYEEFLEVD FSFEIEGLAR FRVNAFNQNR GAAAVFRTIP SKILTLEQLN APRIFADLAL KPRGLVLVTG PTGSGKSTTL AAMVNHLNET EYGHILTVED PIEFVHDSKK CLINQREVGP MTLSFAAALK SALREDPDAI LVGEMRDLET IRLAMTAAET GHLVFGTLHT SSAAKTIDRI IDVFPAEEKE MVRAMLSESL QAVISQTLCK TKDGQGRVAA HEIMLGTSAI RNLIREAKVA QMYSTIQTSS SVGMQTLDQN LTDLVRRNII SPAEARGKAK IPENFPG
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