| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_0625 |
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| Symbol | rpsD |
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| ID | 4668048 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax citrulli AAC00-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008752 |
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| Strand | + |
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| Start bp | 676238 |
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| End bp | 676861 |
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| Gene Length | 624 bp |
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| Protein Length | 207 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 639821829 |
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| Product | 30S ribosomal protein S4 |
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| Protein accession | YP_969003 |
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| Protein GI | 120609325 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0522] Ribosomal protein S4 and related proteins |
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| TIGRFAM ID | [TIGR01017] ribosomal protein S4, bacterial/organelle type |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGGCACGTT ACCTCGGCCC CAAGGCCAAA CTCTCCCGCC GTGAAGGCAC CGACCTGTTC
CTGAAGAGCG CACGCCGCTC CATCGCGGAC AAGGCCAAGT TCGACTCTAA GCCCGGCCAG
CACGGCCGCA CCTCCGGCGC CCGCACCTCC GACTTCGGTC TGCAGCTGCG CGAAAAGCAG
AAGGTCAAGC GCATGTACGG CGTGCTGGAA AAGCAGTTCC GCCGCTACTT CGAGGCTGCA
GATCGCCGCA AGGGCAACAC CGGTGCCAAC CTGCTGTCGC TGCTCGAGTC CCGCCTGGAC
AACGTGGTGT ACCGCATGGG CTTCGGCTCC ACCCGCGCCG AGGCGCGCCA GCTGGTGTCC
CACAAGGCCA TCACGGTGAA CGGCCAGTCC GTGAACATCG CTTCCTACCT CGTGAAGCCC
GGCGACGTGG TGGCCGTGCG CGAGAAGTCC AAGAAGCAGG CCCGCATCGT GGAAGCGCTG
CAGCTGGCCC AGCAGGTGGG CATCCCCGCC TGGGTGGAAG TGAATGCCGA CAAGGTCGAA
GGTACCTTCA AGAAGGCTCC CGACCGCGAC GAGTTCGGTG CAGACATCAA CGAATCCCTG
ATCGTTGAGT TGTACTCGCG CTAA
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| Protein sequence | MARYLGPKAK LSRREGTDLF LKSARRSIAD KAKFDSKPGQ HGRTSGARTS DFGLQLREKQ
KVKRMYGVLE KQFRRYFEAA DRRKGNTGAN LLSLLESRLD NVVYRMGFGS TRAEARQLVS
HKAITVNGQS VNIASYLVKP GDVVAVREKS KKQARIVEAL QLAQQVGIPA WVEVNADKVE
GTFKKAPDRD EFGADINESL IVELYSR
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