Gene Aave_0428 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_0428 
Symbol 
ID4667102 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp462442 
End bp464235 
Gene Length1794 bp 
Protein Length597 aa 
Translation table11 
GC content70% 
IMG OID639821635 
Productmethyl-accepting chemotaxis sensory transducer 
Protein accessionYP_968809 
Protein GI120609131 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0840] Methyl-accepting chemotaxis protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGCCC GCTCCCTGAC CGTTTCACAG CGCCTGCTTA TCGCTTTCGG CCTGGTGATC 
GCCATCTTCG TCGCCGTGGC CGCCACCGCG CTCGTCAGCA GCCGCAGCCT CGCGGAAGCC
GAATCGTGGA ATGAACACAC CTACCAGGTG CTCGACCGCT CCAACGCGCT GCTCAGGAGC
ATGATCAACA TGGAAACCGG TGCGCGCGGC TTCCTGCTCA GTGGGGACGA AAAGCACCTG
GAGCCATGGA ACGGCGGCGC CCGGGAATTC AACGAGGCGT TTGCCGACAT CAAGGGCATG
ACGGCCGACA ATCCCGTGCA GCAGCAGCGC CTGGAGGCCA TGAAGGCCCG GGAAACCGAA
TTCGCATCCG TGCTGTCCGG GCTCATCCAG GCGCGGCGTG AAGTCACCGC GGGCAGCAGG
ACCCTGCAGG ATTTACTGCC CCAGTTCGGC CAGGGCAAGG ACAAGGCCGC CATGGACGCC
TTCCGGGCGC TGCAGAAGGA ACTGGACCAG GCGGAATCGG GCCTGCTGGC CGAACGCAAG
GCGGGAGCCG ACCGGATGCG CGGCATCAAT ACCGCCGTGA TCCTGGCCGG GTCGGCGCTG
GCCGTGGCAC TGGCCGGCGC ACTGGGCATC TGGGTCACGC GCTCCATCAC GCGCCAGCTC
GGCGGCGAAC CGGACTACGC GACCGGCATC GTGCGGCAGA TCGCCCAGGG CAACCTGGCC
GTGGAAGTGG ACACCCGCGC CGGAGACCGG TCCAGCCTGC TGGCCGGCAT GAAGGACATG
CGCGATCAGT TGGCCCGCGT GGTCGGGCAG GTGCGGCAGA GCAGCGATTC CATCGCCACG
GGCAGCACGC AGATCGCCAC CGGCAACGCC GACCTGAGCC AGCGCACCGA GGAACAGGCG
TCCAACCTCC AGCAGACGGC CGCTTCCATG GAGCAGTTGA CGGCCACCGT GAAGCACAAC
GGCGACACCG CCCGCCAGGC CACGCAACTG GCGAATTCCG CCAGCGAGGT CGCGGAGCGC
GGCGGCACGG TGATGGGCCA GGTGGTGAGC ACCATGGGCG CCATCACCGA TTCCAGCCGC
AGGATTTCGG ACATCATCGG CGTCATCGAC GGCATCGCGT TCCAGACCAA CATCCTCGCG
CTCAACGCGG CGGTGGAGGC GGCACGTGCC GGCGAGCAGG GCCGCGGCTT CGCGGTGGTG
GCGAGCGAGG TGCGCGGCCT CGCCCAGCGC AGCGCCGATG CCGCCAAGGA AATCAAGGCC
CTCATCTCCA CCAGCGTGGA GAAGGTGGAG GCCGGCAGCC AGCAGGTCGA GGAGGCCGGC
CGGACCATGT CCGACATCGT CACCCAGGTC AAGCGCGTGA ACGACCTGAT CAGCGAAATC
AGCGCCGCCA CCCAGGAACA GACGCAGGGC ATCGGCCAGG TGAGCGAAGC GGTGAGCCAG
CTCGACCAGG TGACGCAGCA GAACGCCGCG CTGGTCGAGG AAAGCGCCGC CGCCGCGGAC
AGCCTCCGGG CACAGGCCGG CAGGCTCGTG GATGCGGTGA GCCAGTTCCG CCTCCACCAC
GACCAGGGCC TGCCAGCCCC GGCACCGGTC CCCGTGGCCG CACCGCGCGC CGTCGCGGCA
CCGGCGACGG CGGGCACCCT GCCTGCCGCC AGGCCGGCCC CGGCCCGGGT GCCTGCCCCG
CCGCGCGCAC CGGCCCTGGC AGCCCGCCGA CCCGCGCCCG TGCCCACGAA GGCCCCCGCG
CCTTCGCTGG CCCTGGCGGG CAGCTCGGGC GAGGACGACT GGACGAGCTT CTGA
 
Protein sequence
MAARSLTVSQ RLLIAFGLVI AIFVAVAATA LVSSRSLAEA ESWNEHTYQV LDRSNALLRS 
MINMETGARG FLLSGDEKHL EPWNGGAREF NEAFADIKGM TADNPVQQQR LEAMKARETE
FASVLSGLIQ ARREVTAGSR TLQDLLPQFG QGKDKAAMDA FRALQKELDQ AESGLLAERK
AGADRMRGIN TAVILAGSAL AVALAGALGI WVTRSITRQL GGEPDYATGI VRQIAQGNLA
VEVDTRAGDR SSLLAGMKDM RDQLARVVGQ VRQSSDSIAT GSTQIATGNA DLSQRTEEQA
SNLQQTAASM EQLTATVKHN GDTARQATQL ANSASEVAER GGTVMGQVVS TMGAITDSSR
RISDIIGVID GIAFQTNILA LNAAVEAARA GEQGRGFAVV ASEVRGLAQR SADAAKEIKA
LISTSVEKVE AGSQQVEEAG RTMSDIVTQV KRVNDLISEI SAATQEQTQG IGQVSEAVSQ
LDQVTQQNAA LVEESAAAAD SLRAQAGRLV DAVSQFRLHH DQGLPAPAPV PVAAPRAVAA
PATAGTLPAA RPAPARVPAP PRAPALAARR PAPVPTKAPA PSLALAGSSG EDDWTSF