| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_0395 |
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| Symbol | |
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| ID | 4665597 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax citrulli AAC00-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008752 |
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| Strand | - |
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| Start bp | 424427 |
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| End bp | 426370 |
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| Gene Length | 1944 bp |
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| Protein Length | 647 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 639821602 |
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| Product | TrbL/VirB6 plasmid conjugal transfer protein |
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| Protein accession | YP_968776 |
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| Protein GI | 120609098 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3846] Type IV secretory pathway, TrbL components |
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| TIGRFAM ID | [TIGR02783] P-type conjugative transfer protein TrbL |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGTCGT GCATCACCCA GCGACGCGCG GCGCTCTTGC TGCTCGTCAT CGCATTGACC
CTCTTTGCGG CGGATGCGGC CTTAGCAGAC GTGCTGAACG ACATTGGCAA CGGCTACAAG
ACCGAGTCGG CCAAGTGGTT CCCCAAGCTC CTGGTTATCG CCAAGTCCCT GTTCTGGAAG
CTAGCGGCGA TTGAATTCGC CTGGGCTTCC ATCCTGTGGG TGCTGAAAAG CCAGGAAATG
CAGTCGTTCA CGGCTGCAGT CGTGCAAAAG CTCATCGGCA TCGGGTTCTT CTACTTCCTG
CTGCAGAACG CCGACTACTG GATTCCTGCC ATCGTGAACA GTCTGGTAAA GGCAGGCAAC
GAAGCGACTG GCCTTCCGGC GCTCACGCCG TCCGAGGTTT TCGACTTGGG CATTGATACG
GCAGTTGGGA TGTTGAAGGG CATCCAGGCG CTGAGCTTGT GGGAGGATTT CGCTACGGTC
GTAGTTGGCG GCCTCGCCGC ACTCGTCATC GTAATTTCGT TCCTGGTCAT CGCTGGGCAA
ATGCTGATCG CGCTCATCGA GAGCTACATC GCCATCAGCG GCGGCGTGCT GTTCCTGGGC
TTCGGCGGTT CGCGGTGGAC GGTCGAGTTC ACGCAGAAAT ACATCAGCTA CGCATTCGCC
ACGGGGATCA AGCTGTTCAT CCTTTACCTC ATCATCGGCG TGGGCACGGC CCAGGCCAGG
ACCTGGGCGT CACTGCTGTT GACGACGGAC TGGAACAACA TTTTCGCGGT GATGGGTGGC
TCGATGCTGC TGGCCTTTCT GGGCTTCCAG ATTCCGAACA TGGCGGCCTC CATGCTGTCC
GGCGCGCCGT CGCTGACGGC AGGCGCGGCA GCAGCGACAT CGGGCGCACT TGCTGCCGGC
ACGGTCGCGG CAGGCGCCAC CGCCATATCC CCAGCGCTAC AGTCCGCCAG AGGCGGTATG
CAGGCACTGC GGGCGGGATA CGACCATCAC CGAGCCGGCG GCAATAGCGC ACTTTCAAGC
GCCCTCAAGG CGGTCGGCAC ATCCACCGTG GACATGGGCC GCGAAGCCGG CCGGAGTGCC
GGCGAGGCCA TAGGCCTTGC CAAACCTACG GCGTCCGAGC GTTCGACAGT GGGTGGCCGC
GCGGCTGAGC GCCGTGACGG CATGACGGCT CAGATCCGTG AAGAACGCGC GGCGATGGCC
GACGCAGGCG GCATGAGCAA GAGCAGCGAA AGCGATGCAG GCGCCACGTG CGCGCCGGCC
GAAAGCGATG GCGCGAAGAA CGGTAGCGCC GACAGCAAAA GCACGTCGGC CGCTCCTGTA
GTTCCGCCGC CTGGGACACC CTCCGGCGCA ACCGGTAGGC CCGTTGACGA GCTCCACGGA
GCCTCCAAAC CCATGGCAGG CCATCCGCAG GTTGCCGATG ATTACGGCAA CGTAGTCGCG
CCGCCCTCGT CCAAGATTGC CGAGAGCAAC GCTGGCGGAG TCGGCACGTC GGCCACGAAT
GTAGCCGCCG CGAACACCAG CGCGGTCAAC ACCTCGGCAA CGGGCGTGAA TGCTGCGCAG
GCAGGTAGCT CGGGTAGCGT GCCCGCCCAG ACACTGGCCG CTGCCACACC GGAAGCCCAA
CGCCAGGTAG GCCAGGACTC CGGCAGTACG GTGTATCCAC CCTCCGCCAA GATCGCAGAG
AGCGACGCGG GCGGAGCCGG TACGTCAGCC GCGGGCGTGT CTTCGACGAA CACCAGCGCG
GGCAACACCT CGACCACGGA CAAAGCAGCA TCATCTGGCG GTGGGTCATC CGCCCCCGCC
CCAGAGGCGG GAAAAAGCGG CCCGACCTTG GGCCGCGACA AGGCCCCATT CCAGGATCTG
CAGCGCGTCA GGCCGCCACA GATACCGAAT GACGCCGCGC CCCAGGCCGG GGTGAATATC
CGCCTCACGC ACTCCGAGGA CTAG
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| Protein sequence | MTSCITQRRA ALLLLVIALT LFAADAALAD VLNDIGNGYK TESAKWFPKL LVIAKSLFWK
LAAIEFAWAS ILWVLKSQEM QSFTAAVVQK LIGIGFFYFL LQNADYWIPA IVNSLVKAGN
EATGLPALTP SEVFDLGIDT AVGMLKGIQA LSLWEDFATV VVGGLAALVI VISFLVIAGQ
MLIALIESYI AISGGVLFLG FGGSRWTVEF TQKYISYAFA TGIKLFILYL IIGVGTAQAR
TWASLLLTTD WNNIFAVMGG SMLLAFLGFQ IPNMAASMLS GAPSLTAGAA AATSGALAAG
TVAAGATAIS PALQSARGGM QALRAGYDHH RAGGNSALSS ALKAVGTSTV DMGREAGRSA
GEAIGLAKPT ASERSTVGGR AAERRDGMTA QIREERAAMA DAGGMSKSSE SDAGATCAPA
ESDGAKNGSA DSKSTSAAPV VPPPGTPSGA TGRPVDELHG ASKPMAGHPQ VADDYGNVVA
PPSSKIAESN AGGVGTSATN VAAANTSAVN TSATGVNAAQ AGSSGSVPAQ TLAAATPEAQ
RQVGQDSGST VYPPSAKIAE SDAGGAGTSA AGVSSTNTSA GNTSTTDKAA SSGGGSSAPA
PEAGKSGPTL GRDKAPFQDL QRVRPPQIPN DAAPQAGVNI RLTHSED
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