Gene Aave_0386 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_0386 
Symbol 
ID4666218 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp412676 
End bp413896 
Gene Length1221 bp 
Protein Length406 aa 
Translation table11 
GC content73% 
IMG OID639821592 
Productkelch repeat-containing protein 
Protein accessionYP_968767 
Protein GI120609089 
COG category[S] Function unknown 
COG ID[COG3055] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCACGC CATCGTCCCC CACTTCCGGC CACCCGGCTT CCGCCGCGCA GCGGACGAAC 
CCCTGGCAGG TATCGCGCCG CAGGAGCCTT GTCGGGCTGG CCTGCGCGCT CGCGGCGTGC
ACTGCCGCAG CGGGACCGAA GCCCGGCCCC CAGGATGACG GGGTGTGGAC GCGGCTGTCC
AGCGAAGGCG CTCCGTCCGC GCGCAGCGCA CCGGTTGCGG CAGCACTCCG GGGGTCCATC
TACCTTTTCG GCGGCGTGAA GGACGACTTC CGCGCCGGCA CCAACGATTT CCTCAACGAC
CTGCACCGCT ACGACGTGCA CGCCAACCGC TGGACGCGTC TGGTCCCCGC GGGCGATGCG
CCTTCGCCCC GCGCCTTCAC CGGCGGCGTA GCCATGCCGC ACCGGGGATG GGTCGTGGTA
TTCGGCGGGG CCCGCTACTC CGCCGACCTG TCGGACTTCA CGCCGCTGGG CGACGTCTGG
GCCTACGACA CCCGGGCCGG GCGCTGGGAA GCACTGTCGG GCGTGGCGCC CGGCGGTGCT
CCGGCCCCCA GCCCGCGGGC GTGGCCCACG GTCTGGCGCG CGGGCGACCA GCTCTACGTG
TTCGGCGGCG TGGAGGCGGG GTTCCGCACG CTCAACGACC TGTGGCGGTT CGATGTGTCC
ACGCGTACCT GGACGCAGCT CTCGCCCCAT GGCGCGCCGG GCTCTCCCCC TCCCCGCTAT
TCGGGCGCGG TGACCGGCGA ACCCTGGCGC GGGCAGATTG CACTCTACGG CGGCGAGGCC
ACCACCGGCC AGGGCGGCTT CGTCTTCCTG CGGGACACCT GGACGTTCGA CCTGCGGACC
CTGGCCTGGC GGCAGGCCAC CCCCGCCCCG GGGGAGGACG TCGATCCGCC CCAGAACCAC
GGCGCGGACG CGCTGCTCGG CAACGGCCTG CTGATCGCCG GGGGGGACCA GCCGGGGGGC
GCCACCGGCT GCGGCGCCCA GTTCAACCAG AACCCGACCA ACGCATTGTG GCGCCTGGAC
CTGAACACGG CCGCATGGCG GCACCTCGCG CCGCAGGGCG ACGTTTTCCC GCGCATCAAG
CGCACCAGCG CGGCCACGGT GATGGGCGAG ATGTACGTGT TCTCGGGCTT CGGGTTCAAT
TGCGAGGCCG GCAGCGGCGG CCAGGTCTGG AACACCGACG TGTGGCGCTA CACGCCGCCG
TACCGGTATT GGGGCCATTG A
 
Protein sequence
MPTPSSPTSG HPASAAQRTN PWQVSRRRSL VGLACALAAC TAAAGPKPGP QDDGVWTRLS 
SEGAPSARSA PVAAALRGSI YLFGGVKDDF RAGTNDFLND LHRYDVHANR WTRLVPAGDA
PSPRAFTGGV AMPHRGWVVV FGGARYSADL SDFTPLGDVW AYDTRAGRWE ALSGVAPGGA
PAPSPRAWPT VWRAGDQLYV FGGVEAGFRT LNDLWRFDVS TRTWTQLSPH GAPGSPPPRY
SGAVTGEPWR GQIALYGGEA TTGQGGFVFL RDTWTFDLRT LAWRQATPAP GEDVDPPQNH
GADALLGNGL LIAGGDQPGG ATGCGAQFNQ NPTNALWRLD LNTAAWRHLA PQGDVFPRIK
RTSAATVMGE MYVFSGFGFN CEAGSGGQVW NTDVWRYTPP YRYWGH