Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Aave_0351 |
Symbol | |
ID | 4665387 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax citrulli AAC00-1 |
Kingdom | Bacteria |
Replicon accession | NC_008752 |
Strand | + |
Start bp | 377416 |
End bp | 377985 |
Gene Length | 570 bp |
Protein Length | 189 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 639821557 |
Product | hypothetical protein |
Protein accession | YP_968732 |
Protein GI | 120609054 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.000357166 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
| |
Sequence |
Gene sequence | ATGTCGCGCA ACCGCATGCT CCGGATCCTG CTGGCCGGCA CCCTGTCGCT GGGGGGCTGC AGCCCGTCGC TGGACTGGCG CTCCGTCCGG ATGGACGAAG CCGGCCTGAC CGCGCTGCTT CCGTGCAAAC CGGAGCGTGC CGTGCGGCCC GTCGAGTTGC AGGGGCGCTC CGTGGAGCTT TCCATGGCCG GTTGCGATGC CGATGGCGCC ACCTTCGCCG TATCCCACAT GGTGTTGCCG CAGGGCGCTG GCGCCGCCGA AGCGGGCGTG GTGCTCGCGC AGTGGCGCGC GGCGACACTG GCGCGTATCG GCGTTGCGGC GGACACGGCA GGCGCTGGCG TCCCGTTCAC GCCCCGCGGC GCGCTGCAGT TGCCGCAGTC CGTGCGCCTG CAGGCGCACG GTGCGGCGCC CGGGCAGGGG GCCGATGTGG CGATGGATGC CGCATGGTTC GCCCGGGCCG AAGCCGCAGG GGATGGGCCG CGAATGCGGC TCTACCACGC GGTGATCTAC AGCCCGCAAC CGCGGGCTGC GGTGGCGGAC ACGTTCTTCC CCGGGCTCGC ATTGCGATAA
|
Protein sequence | MSRNRMLRIL LAGTLSLGGC SPSLDWRSVR MDEAGLTALL PCKPERAVRP VELQGRSVEL SMAGCDADGA TFAVSHMVLP QGAGAAEAGV VLAQWRAATL ARIGVAADTA GAGVPFTPRG ALQLPQSVRL QAHGAAPGQG ADVAMDAAWF ARAEAAGDGP RMRLYHAVIY SPQPRAAVAD TFFPGLALR
|
| |