Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Aave_0342 |
Symbol | rpsS |
ID | 4668195 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax citrulli AAC00-1 |
Kingdom | Bacteria |
Replicon accession | NC_008752 |
Strand | + |
Start bp | 372920 |
End bp | 373198 |
Gene Length | 279 bp |
Protein Length | 92 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 639821548 |
Product | 30S ribosomal protein S19 |
Protein accession | YP_968723 |
Protein GI | 120609045 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0185] Ribosomal protein S19 |
TIGRFAM ID | [TIGR01050] ribosomal protein S19, bacterial/organelle |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.0483388 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.000267992 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
| |
Sequence |
Gene sequence | ATGACTCGTT CTCTCAAAAA GGGTCCGTTT GTTGACCACC ACTTGCTGGC CAAGGTCGAG AAGGCCGTCG CCACCAAGGA CAAGAAGCCA GTCAAGACCT GGTCGCGCCG CTCCATGGTC CTGCCCGAGT TCATCGGCCT GACCATCGCC GTCCACAACG GCAAGCAGCA CGTGCCTGTC TATATCACCG ACCAGATGGT GGGCCACAAG CTGGGCGAAT TCGCCCTGAC GCGCACCTTC AAGGGTCACC CCGCGGACAA GAAGGTCCAG AAGAAGTAA
|
Protein sequence | MTRSLKKGPF VDHHLLAKVE KAVATKDKKP VKTWSRRSMV LPEFIGLTIA VHNGKQHVPV YITDQMVGHK LGEFALTRTF KGHPADKKVQ KK
|
| |