Gene Aave_0332 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_0332 
Symbol 
ID4668986 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp363903 
End bp365084 
Gene Length1182 bp 
Protein Length393 aa 
Translation table11 
GC content67% 
IMG OID639821538 
Productpenicillin-binding protein 6 
Protein accessionYP_968713 
Protein GI120609035 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1686] D-alanyl-D-alanine carboxypeptidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0227892 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCATGCCT CCCTGAAGTC CTTCCTGCCC CTGCTGCGCT CCTTCGCCAT GGCCGCCGCG 
CTCGCGCCTG CCGCACTCTG GGCGCAGGTG CAGGCGCCCC AGCCGCCCGA GATCGCCGCG
CGCAACTACC TGCTGCTGGA CGTGACCGCC GGGCAGGTAC TGGCCGCCAA GGACATCGAC
GCCCCCGTGG AGCAGGCGTC CTTGACCAAG CTCATGACGG GCTACCTGGT GTTCGATGCG
CTGCGCGCCA AGAAGATCAC GCTGGAGCAG AGGCTCCCCG TGAGCGAGCG CGCCTGGAAG
ATGCCGGGCT CGCGCATGTT CATTGATCCC AAGATGCAGG TGCCGGTGGA AGACCTCATC
AAGGGCATGA TCGTGCAGTC GGGCAACGAC GCCACCATGG CCCTCGCCGA GGGCGTGGGC
GGCACGGCCG AGAACTTCGT CAAGCTCATG AACGACCAGG CCAGGGCCCT GGGCATGAAG
AACACGGCCT ACAAGAATCC CGAGGGCCTC ACCGAGCCCG GCCACACGAC CACGGCGCGC
GACCTGAGCG TGCTCGCCAC GCGGCTCATG AAGGATTTCC CGGAGTACAT GCATTACTAC
TCCACCAAGC ATTACGCCTA CCCGGGCACG CCGCCGTCCA ACGGCACCAA CCGCAATGCG
CTGCTGTTCC GCGACCCGAC CGTCGATGGC CTCAAGACCG GCCACACCGC GGCAGCGGGC
TATTGCCTGG TCGCCACGTC CAAGCGCGAT TTCCCGAACA TCGGCCAGCG CCGGCTGCTG
TCCATCGTGC TCGGTGCAGC CAGCGAAAGC GCCCGCGCCA ACGAAAGCCA GAAGCTCCTG
AACTGGGGCT ACACCGCCTA CGATGCCGTC AAGCTGTTCG ATGCAGGCCA GCCTGCCGCC
ACCCCGGCGC TCTGGAAAGG CGTGCAGAAC ACCATCAAGA TCGGGCGCCC CGATCCCATC
GTCGTCACCG TGCCGTCGGG TTCGGCCGGC AAGATCACGA CCCAGGTCGT CCGGCAGGAC
CCGCTGGTCG CACCGCTGAC GAAGGGCCAA TCCATCGGCA CGCTCAAGGT GTCGCTGGGC
GAACAGCAGA TCGCCGAGGT GCCCCTGGTG GCGCTCGAGA CCGTCGATCA GGCGGGCATC
TTCGGCCGTG CCTGGGATGC CATCCGGCTC TGGATCAAGT GA
 
Protein sequence
MHASLKSFLP LLRSFAMAAA LAPAALWAQV QAPQPPEIAA RNYLLLDVTA GQVLAAKDID 
APVEQASLTK LMTGYLVFDA LRAKKITLEQ RLPVSERAWK MPGSRMFIDP KMQVPVEDLI
KGMIVQSGND ATMALAEGVG GTAENFVKLM NDQARALGMK NTAYKNPEGL TEPGHTTTAR
DLSVLATRLM KDFPEYMHYY STKHYAYPGT PPSNGTNRNA LLFRDPTVDG LKTGHTAAAG
YCLVATSKRD FPNIGQRRLL SIVLGAASES ARANESQKLL NWGYTAYDAV KLFDAGQPAA
TPALWKGVQN TIKIGRPDPI VVTVPSGSAG KITTQVVRQD PLVAPLTKGQ SIGTLKVSLG
EQQIAEVPLV ALETVDQAGI FGRAWDAIRL WIK