Gene Aave_0308 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_0308 
Symbol 
ID4669381 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp341570 
End bp342550 
Gene Length981 bp 
Protein Length326 aa 
Translation table11 
GC content73% 
IMG OID639821514 
Producthypothetical protein 
Protein accessionYP_968689 
Protein GI120609011 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG1463] ABC-type transport system involved in resistance to organic solvents, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAAACA AGTCCCACGC CCTGGCCGCG GGCATTTTCG TGGTCGTGGT GGCGGCGCTG 
CTGGCGGCGC TCGGCCTGTG GCTCACCCGC GACCGGGCCA GCTACCAGCT CTACGAGCTC
TCCACGCGCG AGAGCGTCGG CGGTCTGCAG CCCCAGGCCG CCGTGCGCTA CAAGGGCGTG
GCCGTGGGCA AGGTCACGCG CATCGGCTTC GATCCCGACG TGCCGGGCAA CGTGCTCATC
CGCATCGCCG TCAACGACCA GGCGCCCGTC ACCCCGGCCA CCTTCGCCGT GCTGGGCTAC
CAGGGCGTCA CGGGCCTGGC CCACGTGCTG CTCGATGACG GCAACGGTCC GCAGCCGGCG
CTGCCCCGCG GAGCGAGCGG CCTGCCGCGG CTGCCCCTCA AGAGCTCCCC CTTCAGCCAG
CTGGCGGAGC AGGGGCCGGC CATCCTCGCG CAGGTGCAGC AGGCCACCGA TCGCATCAAC
GACCTGCTGG GCGACGAGAA CCAGAAACGC TTTTCCCTGG CGCTGGAGAA CCTCGGCCAG
GCCGCCGGCA GCGCCAACGC GCTCATGAAG CGGCTCGATG CCACCGTGGA GCAGCGGCTC
GACCCCGCAC TGGCCTCGGT GCCGGCGGTG GCCAGTGATG CCCGCGAGAC ACTGAAAGCC
CTGCGGCAGG CCGGCACCAA CGCCGGTGAT GCCGCCAACG AGGTCAAGGC CGCGGTGCGC
AAGCTCAGCG CCGAAAACGG ACCGCTCGAC CAGATCGCCG ACAGCTCGCA ATCGCTCTCG
CTCGCCGCGG ACCGTTTCGG CCGCGTGACG CTGCCGCGCC TGAACCACGC CGCCGACGAA
ACCTCGCGCG CTGCGCGCCG GCTGGGCCGG GCGGCGAGCG GCTTCAGCGA CAACCCGCAA
TCGCTCATCT ACGGGCCCGG CCGCGCCGCG GGCGGCCCCG GCGAGCCCGG ATTCGAGGCG
CCTGCCGTCG CGGCCCCGTA A
 
Protein sequence
MENKSHALAA GIFVVVVAAL LAALGLWLTR DRASYQLYEL STRESVGGLQ PQAAVRYKGV 
AVGKVTRIGF DPDVPGNVLI RIAVNDQAPV TPATFAVLGY QGVTGLAHVL LDDGNGPQPA
LPRGASGLPR LPLKSSPFSQ LAEQGPAILA QVQQATDRIN DLLGDENQKR FSLALENLGQ
AAGSANALMK RLDATVEQRL DPALASVPAV ASDARETLKA LRQAGTNAGD AANEVKAAVR
KLSAENGPLD QIADSSQSLS LAADRFGRVT LPRLNHAADE TSRAARRLGR AASGFSDNPQ
SLIYGPGRAA GGPGEPGFEA PAVAAP