Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Aave_0296 |
Symbol | |
ID | 4669687 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax citrulli AAC00-1 |
Kingdom | Bacteria |
Replicon accession | NC_008752 |
Strand | + |
Start bp | 328018 |
End bp | 328536 |
Gene Length | 519 bp |
Protein Length | 172 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 639821502 |
Product | putative rod shape-determining MreD transmembrane protein |
Protein accession | YP_968677 |
Protein GI | 120608999 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2891] Cell shape-determining protein |
TIGRFAM ID | [TIGR03426] rod shape-determining protein MreD |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCATGC CCCGCGGCGA ACAGTTGCTG CTGCCGGTGC GCCCTGCCTT CATCGCGGCC AGCCTGCTGG TGGCGCTGGC GTTCAACATG CTGCCGCTGG GGCGCTTGGT GTGGACGCCC GACCTCGTCA TGGTGCTGCT CGTCTTCTGG GGCGTGCACC AGCCCCAGCG CGTGGGCATG GCCGTCGCCT TCGCCATGGG CCTGTGCATG GACGTCTACC AGACCGCGCT GCTGGGGCAG CATGCGCTGG CCTACTGCGC CATGATGTTC GGCGCCATCT ACCTGCACCG GCGCCTGCTG TGGTTCAGCC CGTTCTCGCA GGCGCTGCAG GTGCTGCCCC TGTTCCTGGC CGCGCATGCG ATCGAACTGC TGGTGCGCAT GGTGTCGGGC GGCATCCTGC CCGGGCTGCC GGGGCTGATC TCGCCCGTGA TCGAGGCCCT GCTGTGGCCG CTCGCCAGTT GGGTGCTGCT CGCGCCGCAG CGCCTGCCGC CCGACCGCGA CGAGAACCGG CCGCTCTGA
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Protein sequence | MIMPRGEQLL LPVRPAFIAA SLLVALAFNM LPLGRLVWTP DLVMVLLVFW GVHQPQRVGM AVAFAMGLCM DVYQTALLGQ HALAYCAMMF GAIYLHRRLL WFSPFSQALQ VLPLFLAAHA IELLVRMVSG GILPGLPGLI SPVIEALLWP LASWVLLAPQ RLPPDRDENR PL
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