Gene Aave_0271 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_0271 
Symbol 
ID4668566 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp300876 
End bp301973 
Gene Length1098 bp 
Protein Length365 aa 
Translation table11 
GC content76% 
IMG OID639821477 
Product2-nitropropane dioxygenase, NPD 
Protein accessionYP_968652 
Protein GI120608974 
COG category[R] General function prediction only 
COG ID[COG2070] Dioxygenases related to 2-nitropropane dioxygenase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGACGC CCGTCCCTCC ATCCCGCCGC ACTCCGCTGT TCGACCGCCT GGGCCTCACC 
CTGCCGATCG TGCAGGGCCC CATGACCGGC TCCGACACGC CCGCCCTGGC TGCCGCCGTG
TCCGAAGCCG GCGGGCTGGG CATGCTGGGC TGCGGCATGC GCTCGCCCGC CGCCATGGCC
GAAGCCGCCG CCGAAGTGCG CCGCCGCACG GCCCGCCCCT TCGGCATGAA CCTCTTCGTG
CTGGAGATGC CCGCGCCCGA CGCCGCCACG GTGCGCGAAG CGCTGGACCG GCTGGCGCCG
CTGTATGCCG ACTTCGGGCT GGAGCCGGCC GTGCCCGCGC AATGGTGCGA AGACTTCGAG
GCGCAGTTCG AGGCCCTGGT CGAGGCCCGC CCGGCCGTCG CGAGCTTCAC CTTCGGCATC
CTCGGCGCGC GCCAGGTGGA GCGGCTGCAG GCGGCGGGCT GCGTCGTGAT CGGCACCGCC
ACCACCGTGG CGGAGGCCCG TGCCTGGGCC GACGTGGGCG CCGATGCCGT CTGCGCCAGC
GGGCTCGAGG CCGGCGGCCA CCGGGGCACC TTCCTGGCCG ACTTCGAATC CAGCCAGGTC
GGCACGCTGG CGCTGGTGCC GCCGTGCGTG GACGCGCTGC GCATTCCGGT CATCGCGGCC
GGCGGCATCA TGGACGGGCG CGGCATCGCC GCCGCGCAGG CCCTGGGTGC CGAAGGCGTC
CAGATGGGCA CGGCCTTCCT CGCGTGCCCC GAGTCGGCCA TCGGCCCGGC CTACCGGGCC
GCGCTGGCCC GGGCATGCGA AACCGATACG CGCATCACCC GGGTGTTCTC GGGCCGGCCC
GCGCGCGGCA TCGTCAACGC CACCATGGAA CAGTTCGCCC CCTGGGAAGG CAGCGTGCCG
GCCTACCCGG TGCAGAACGC ACTGATGGGC CCGGTGCGCC GTGCGGCCGC CGCCCAGGGC
CGTGCCGATG CGCTGGCCCT CTGGGCAGGC CAGGGCGTCG CGGCGGTGCG GCCGATGCCG
GCCGGCGAAC TGGTGGCGCT GCTGGCCAGG GAATGGCGGG CAGCGGCGGG CGGGGTCAGC
GCGGGCTCGC CGGCGTGA
 
Protein sequence
MPTPVPPSRR TPLFDRLGLT LPIVQGPMTG SDTPALAAAV SEAGGLGMLG CGMRSPAAMA 
EAAAEVRRRT ARPFGMNLFV LEMPAPDAAT VREALDRLAP LYADFGLEPA VPAQWCEDFE
AQFEALVEAR PAVASFTFGI LGARQVERLQ AAGCVVIGTA TTVAEARAWA DVGADAVCAS
GLEAGGHRGT FLADFESSQV GTLALVPPCV DALRIPVIAA GGIMDGRGIA AAQALGAEGV
QMGTAFLACP ESAIGPAYRA ALARACETDT RITRVFSGRP ARGIVNATME QFAPWEGSVP
AYPVQNALMG PVRRAAAAQG RADALALWAG QGVAAVRPMP AGELVALLAR EWRAAAGGVS
AGSPA