Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Aave_0200 |
Symbol | |
ID | 4667935 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax citrulli AAC00-1 |
Kingdom | Bacteria |
Replicon accession | NC_008752 |
Strand | + |
Start bp | 225025 |
End bp | 226074 |
Gene Length | 1050 bp |
Protein Length | 349 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 639821411 |
Product | hypothetical protein |
Protein accession | YP_968586 |
Protein GI | 120608908 |
COG category | [S] Function unknown |
COG ID | [COG3181] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCCATCCA TCCGCGCCCA CGCACTGCCG TCCGCCCATG CCCCCACGCG CCGCCGCGTC CTGGCCCTTG CGGCCGGTGG CGCGGTCGCT GCCGCGGCCG CCCTGGCGGG CGTGCTGCCC GCGCCGGCCC ATGCGCAGCA GGCCGACGCC GCCGCCTGGC CCGCCAAGCC CGTCCGCTGG GTCGTCCCGT TCCCGCCCGG CGGCGCCATG GACGTCATCG CCCGCACCCT GGGCGAGCGC GCCGGCCGCA CCCTGGGCCA GCCCTTCGTG ATCGAGAACC GCCCCGGTGC GGGCGGCAAC ATCGGCGCGG ACGCCGTCGC CAAGTCGCCG GCCGACGGAT GCACGATCAT GATCACCTCC ATCGGCATGG CCACCAACAA GGCGCTCTAC GCCAAGTTGA GCTACGACCC GGTGAAGGAC TTCGCGCCCG TCAGCCTGCT GGCCATCGTG CCCAACGTGC TCGTCGTCAA CGCCAACAGC CCCGACAGGA CGGTGGCCGA CGTGATCGCG CACGCCAAGC GCGAGCCCGG CAAGCTCACC TACGCCTCGG CCGGCAACGG CACCTCCATC CACCTGGCCG GCGAGGTGTT CGCTTCCATG GCCAGGCTCA ACCTGCTGCA CGTGCCCTAC AAGGGCAGCG GCCCGGCCAT GACCGACATG CTGGGCGGGC AGGTGGACCT GATGTTCGAC AGCATCACCT CCGCCGCCCC GCACATCCAG TCCGGCAAGC TGCGCGCCCT GGGCGTCACC AGCGCCAGGC GCTCGGCCAC GCTGCCGGGC GTGCCCACCA TCGCCGAGGC CGGCGTGCCC GGCTACGAGG TCTCGCCCTG GTTCGCCGTG TTCGCCCCGG CCGGCACGCC CGCGCCCATC GTGCAGAAGC TCAACGCCGC CCTGCTGGAC GCCATGAAGC AGCCGGAAAC CAGGGCCCGC TTCGACGCCA TCGGCGCCGA GCCCATCGGC AGCACGCCCG CGCAGCTGGC GACGCACCTG GACAAGGAAA TGGCGCGGTG GGGCACGCTG ATCAAGGACC GCAACATCCG GATGGATTGA
|
Protein sequence | MPSIRAHALP SAHAPTRRRV LALAAGGAVA AAAALAGVLP APAHAQQADA AAWPAKPVRW VVPFPPGGAM DVIARTLGER AGRTLGQPFV IENRPGAGGN IGADAVAKSP ADGCTIMITS IGMATNKALY AKLSYDPVKD FAPVSLLAIV PNVLVVNANS PDRTVADVIA HAKREPGKLT YASAGNGTSI HLAGEVFASM ARLNLLHVPY KGSGPAMTDM LGGQVDLMFD SITSAAPHIQ SGKLRALGVT SARRSATLPG VPTIAEAGVP GYEVSPWFAV FAPAGTPAPI VQKLNAALLD AMKQPETRAR FDAIGAEPIG STPAQLATHL DKEMARWGTL IKDRNIRMD
|
| |