Gene Aave_0200 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_0200 
Symbol 
ID4667935 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp225025 
End bp226074 
Gene Length1050 bp 
Protein Length349 aa 
Translation table11 
GC content73% 
IMG OID639821411 
Producthypothetical protein 
Protein accessionYP_968586 
Protein GI120608908 
COG category[S] Function unknown 
COG ID[COG3181] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR01409] Tat (twin-arginine translocation) pathway signal sequence 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCATCCA TCCGCGCCCA CGCACTGCCG TCCGCCCATG CCCCCACGCG CCGCCGCGTC 
CTGGCCCTTG CGGCCGGTGG CGCGGTCGCT GCCGCGGCCG CCCTGGCGGG CGTGCTGCCC
GCGCCGGCCC ATGCGCAGCA GGCCGACGCC GCCGCCTGGC CCGCCAAGCC CGTCCGCTGG
GTCGTCCCGT TCCCGCCCGG CGGCGCCATG GACGTCATCG CCCGCACCCT GGGCGAGCGC
GCCGGCCGCA CCCTGGGCCA GCCCTTCGTG ATCGAGAACC GCCCCGGTGC GGGCGGCAAC
ATCGGCGCGG ACGCCGTCGC CAAGTCGCCG GCCGACGGAT GCACGATCAT GATCACCTCC
ATCGGCATGG CCACCAACAA GGCGCTCTAC GCCAAGTTGA GCTACGACCC GGTGAAGGAC
TTCGCGCCCG TCAGCCTGCT GGCCATCGTG CCCAACGTGC TCGTCGTCAA CGCCAACAGC
CCCGACAGGA CGGTGGCCGA CGTGATCGCG CACGCCAAGC GCGAGCCCGG CAAGCTCACC
TACGCCTCGG CCGGCAACGG CACCTCCATC CACCTGGCCG GCGAGGTGTT CGCTTCCATG
GCCAGGCTCA ACCTGCTGCA CGTGCCCTAC AAGGGCAGCG GCCCGGCCAT GACCGACATG
CTGGGCGGGC AGGTGGACCT GATGTTCGAC AGCATCACCT CCGCCGCCCC GCACATCCAG
TCCGGCAAGC TGCGCGCCCT GGGCGTCACC AGCGCCAGGC GCTCGGCCAC GCTGCCGGGC
GTGCCCACCA TCGCCGAGGC CGGCGTGCCC GGCTACGAGG TCTCGCCCTG GTTCGCCGTG
TTCGCCCCGG CCGGCACGCC CGCGCCCATC GTGCAGAAGC TCAACGCCGC CCTGCTGGAC
GCCATGAAGC AGCCGGAAAC CAGGGCCCGC TTCGACGCCA TCGGCGCCGA GCCCATCGGC
AGCACGCCCG CGCAGCTGGC GACGCACCTG GACAAGGAAA TGGCGCGGTG GGGCACGCTG
ATCAAGGACC GCAACATCCG GATGGATTGA
 
Protein sequence
MPSIRAHALP SAHAPTRRRV LALAAGGAVA AAAALAGVLP APAHAQQADA AAWPAKPVRW 
VVPFPPGGAM DVIARTLGER AGRTLGQPFV IENRPGAGGN IGADAVAKSP ADGCTIMITS
IGMATNKALY AKLSYDPVKD FAPVSLLAIV PNVLVVNANS PDRTVADVIA HAKREPGKLT
YASAGNGTSI HLAGEVFASM ARLNLLHVPY KGSGPAMTDM LGGQVDLMFD SITSAAPHIQ
SGKLRALGVT SARRSATLPG VPTIAEAGVP GYEVSPWFAV FAPAGTPAPI VQKLNAALLD
AMKQPETRAR FDAIGAEPIG STPAQLATHL DKEMARWGTL IKDRNIRMD