Gene Aave_0043 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_0043 
Symbol 
ID4666272 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp50075 
End bp50392 
Gene Length318 bp 
Protein Length105 aa 
Translation table11 
GC content64% 
IMG OID639821259 
ProductNIPSNAP family protein 
Protein accessionYP_968434 
Protein GI120608756 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCACCT GCACCCTGCG TTACGTCATC GATCCCTACA AGCTCGCCGA GTTCGAGCAC 
TACGGCCGGC TCTGGATTCC GCTGGTGGAG AAGTTCGGCG GCCGCCACCA CGGCTACTTC
CTGCCCTCGG AAGGCGCCAA CAACATCGCG CTGGCGATGT TCACCTTTCC CTCGTTCGCC
GCCTACGAAA CCTACCGCCA GCAATCGATG CAGGACGCCG AATGCCTCGC GGCCTTCCGG
TACGCGGAAG AGACCCGCTG CATCGTGAGC TACGAGCGCA GTTTCTTCCG GCCGGTGTTC
GGCACCGGGC CGGCTTAG
 
Protein sequence
MITCTLRYVI DPYKLAEFEH YGRLWIPLVE KFGGRHHGYF LPSEGANNIA LAMFTFPSFA 
AYETYRQQSM QDAECLAAFR YAEETRCIVS YERSFFRPVF GTGPA