| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_0004 |
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| Symbol | |
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| ID | 4666220 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax citrulli AAC00-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008752 |
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| Strand | - |
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| Start bp | 5603 |
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| End bp | 7309 |
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| Gene Length | 1707 bp |
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| Protein Length | 568 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 639821221 |
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| Product | putative transcriptional regulator |
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| Protein accession | YP_968396 |
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| Protein GI | 120608718 |
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| COG category | [K] Transcription |
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| COG ID | [COG2865] Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATCCCA CCGCCCTGCG AGCCATGTTG GAGTCCTTGC GGAGTCTGCC GCGTGAGCAG
GCGGTGGTGG AGTTCAAGTC GAATTTGGCC GATCCCGAGA AGATCGGTGC CTACATTTCA
GGGTTGGCCA ACACGGCTGC ATTGCAAGGC CGCGACCGCG CCTGGCTGGT GTGGGGCGTG
GAAGATGGCA GCCATCGGGT GCTGGGTACG GTGTTCGATC CGTTCGGTCA GAAGATTGGC
AATCAGTCTC TGCAGATGTG GCTGCAGGTA ATGACGCAGC CCCGTGCCGA CTTTGCCTTC
CACGAGCTGG ACTGTGACGG TCTGCGGGTG GTGATGCTCG AAATTCATTC CGCACGCGCT
GCGCCCATGG CCTTTCAACA CACACGCTAC ATCCGCGTGG ACAGCCACCT GGTGAAACTG
GCGGACTACC CCAGCCATGA AGCGCGCTTG TGGAATGCTC TGGGCACATC AGAAGACTGG
ACGGGCGTGG TGGTGCCTGA GGCAACGCTG GATGATCTGG ACCCTCAGGC CGTTGCTGCC
GCACGGGTGC GGTACGCCGA GTACTTGGTG CGTGGCGAGC CCGACGCTTC AAAGCACGAG
GCGATCCGTA CCGAGGTGGC GGCATTGACG GTGCCCACGC TGCTGAACAA GGCCCGTGTG
ACCAAGCAGG GACGGGTGAC CAGGGCAGCC CTGCTGCTGT TGGGCAAGGA TGAGTCCTCG
CACTTCCTGG CTCCTGCGGA CGCGAAGATG ACCTGGGTGC TGCGCGATGC GGGCAACGAT
ACGGTCACGT CACAGCCGTT TGGCGTCCCC TTCCTCCTGG CCACGGAGCA GTTGTGCGCC
CGCATTCGCA ATGTGACGCT GGACCACATG CCCGATGGTT CGCTGTTCCC CACGCCTGTG
CCGCAGTACG ACAACTGGGT GCTGCGCGAG GCGCTGCACA ACTGCGTGGC GCACCAAGAC
TATGGGCTGG GCGGCAAGAT CAATGTGGTG GAACACCCGG ATCGGCTGGT GTTCAGCAAT
CTGGGGCAGT TCATACCGGA GAGCGTGGCG TGGATGCTGG AGCACCAGTC GCCGCCGGAG
CACTATCGCA ACCAGTGGCT TGTCGACGCG ATGATTCGTC TGCGCATGAT CGAGCAGGCG
GGCAGCGGAA TACGCCGGAT GTTTACGACT CAGCGCCAGC GGCTGTTTCC GTTGCCCGAC
TACGAGTTTG GTCAGACCGC GCAGGGGTTT CCGCGCGTGG AATTGACCTT GCAGGGGCGG
ATGCTGGATT CCAAGTTCGC GCGGGTGTTG ATGGCGCGCT CGGATTTGGG CTTGGGCCAG
GTTCTGCTGC TGGACAGGGT GCAGAAGGGC CTGACTCTCT CACCTTCAGA GGCCCGGAGT
TTGCGCGATC TTGGGCTCAT TGAAGGACGT GCGCCCGGCT ATTTCATCTC GGCCAAGATG
GCGGATGCCT TGGGGCAGAA GGCGAAGTAC ATCCACCAGC GGGGTCTGGA TGACCGGTAC
TACCAAAAAT TGGTGCTGGA CTATCTGCAG CAGTATGGTC AAGCCACTAG AACGGATCTG
GACGCCTTGC TACTTCGCAA GCTGCCAGAT GTTTTGACTG ACGTGCAGAA AGCCAACAAG
GTCAAAAACT TGATGCAAAG CATGAAGCGG GCTGGACTGA TCCGTCCCCA TGGGGCCCGC
TCAGCTGCGG TTTGGCGGTT GTGTTGA
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| Protein sequence | MNPTALRAML ESLRSLPREQ AVVEFKSNLA DPEKIGAYIS GLANTAALQG RDRAWLVWGV
EDGSHRVLGT VFDPFGQKIG NQSLQMWLQV MTQPRADFAF HELDCDGLRV VMLEIHSARA
APMAFQHTRY IRVDSHLVKL ADYPSHEARL WNALGTSEDW TGVVVPEATL DDLDPQAVAA
ARVRYAEYLV RGEPDASKHE AIRTEVAALT VPTLLNKARV TKQGRVTRAA LLLLGKDESS
HFLAPADAKM TWVLRDAGND TVTSQPFGVP FLLATEQLCA RIRNVTLDHM PDGSLFPTPV
PQYDNWVLRE ALHNCVAHQD YGLGGKINVV EHPDRLVFSN LGQFIPESVA WMLEHQSPPE
HYRNQWLVDA MIRLRMIEQA GSGIRRMFTT QRQRLFPLPD YEFGQTAQGF PRVELTLQGR
MLDSKFARVL MARSDLGLGQ VLLLDRVQKG LTLSPSEARS LRDLGLIEGR APGYFISAKM
ADALGQKAKY IHQRGLDDRY YQKLVLDYLQ QYGQATRTDL DALLLRKLPD VLTDVQKANK
VKNLMQSMKR AGLIRPHGAR SAAVWRLC
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