| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aasi_1414 |
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| Symbol | |
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| ID | 6377535 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Amoebophilus asiaticus 5a2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010830 |
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| Strand | + |
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| Start bp | 1800587 |
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| End bp | 1808191 |
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| Gene Length | 7605 bp |
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| Protein Length | 2534 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 642682486 |
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| Product | hypothetical protein |
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| Protein accession | YP_001958436 |
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| Protein GI | 189502719 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3209] Rhs family protein |
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| TIGRFAM ID | [TIGR01643] YD repeat (two copies) |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.733329 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACAAAG AATTAGAAAA TCAAACCTCA TCTTCCCAAT CCCAATTTCT TAAAACGGAT
AGAGGGAAAA CTAAATCGAA TACTATTGAA ATTCCATCTA TTGCTTTGCC CAAAGGTGGG
GGTGCCATAA AAGGTATCGA TGAAAAGTTT TCTGTGAATG CAGTAAATGG TACGGCTTCA
TTCACAATTC CTTTGCCTTT TTCGCAGGCT CGGAGTGTTA CTCCATCTCT CAGTTTAGCT
TACAATTCTG GAGGCGGTAA TGGCGTTTTT GGGTTAGGTT GGGCAATGGG GCTTGCTTCC
ATAAAACGAA AAACTGACAA AGAACTTCCC CAATATTTCG ATGCCATAGA GTCTGATACC
TTCCTTTTTT CTGAAGCGGA GGATTTGGTT CCGGTCTATA AAAAGGAATA TAAAAAGGAA
ACTGATGGCA GCTTGAGCAA AGATGCTGAT GGAAATTATA TAATCTATTT TATCAAAGAT
GCTAAGGGGA ATTATGTTAT TGATGAAAAA GATTCTTTGG ATAGATCCTA TACGATCAGG
TTTTATAAAC CTCGTATAGA AGGGTTATTT GCCCACATTG AAAAATGGAC GCACAAATCT
TCTAGAGAAA TTAAATGGAG GGTCATTACA AGGGAAAATG TGACTACACT TTTTGGTTGG
AGTGTAAATT CGAGAATTGC AGACCCCAAT GACATGAATA GAGTTTTTGA ATGGCTGCCT
GAATTTGTTT TTGACGACAA AGGAAATTGT TCGCAATACA TCTACAAAAA AGAAGATAAG
GCAGGTTTTG ACCATGCACA GTTACACAAT TGCAACCGTT TTCAGAATGA ACACATTACT
TATACCAATT TATACCTAGA AAAAATTTTG TACGGTAACA AAACGCCTTA CAAAAGCTTC
CATGATCCCT ATCCGAAAGA GACTGATTAC CTGTTCCAAA CTCTATTTGA TTACGGAGAA
TATAACCCCG ATGCTCCTTA TAATAAGATA AAAGAATGGG ATTTTAGAAA AGATGCCTTT
TCCGATTACA AACCAGGTTT TGAAATTCGC ACTGCCCGCT TATGTAAGCG GGTTTTACTT
TTCCATCATT TTGATGAACT CCATGGTGGC TCTGCCTTAG TAAGATCCCT GAATTTTGAA
TATGATACGG CTACCGAAGA AAGTTTTACG TTCCTAAAAT CCATTACAGC ATTTGGCTAC
ATTAAGCAAG CTACCGGGAA TTATACCCAT AAACACCTCC CCGCTACAGA ATTTATCTAC
CAAAAACATG AATGGAATCC CACCCTAAAA ACCATTTCAT TTGACGATAT AGTGCACGCC
CCTTCTGGCC TGGATGAACC GTCATACCAG TTTATTGACC TATTTAATGA AGGCTTATCA
GGCATACTTA CCGAACAGGG AGAAGGCTGG TATTACAAAC ATAATCTGGG AGGCGGGAAA
TTTGAGCAAG CCAAATTAGT TGCTCCTAAG CCCTCATTCG CTGGCTTGGG CAATTCGTTA
CAATTAATGG ACCTAGATGC TGATGGAGGT AAACAACTAG TCAGCCTTAG TAGTGAACCA
AAAGGTTTCT TTGAGCTAAA TGATGAGGAA GAATGGCAAC CGTTCCGAAG TTTTGACAAC
TTACCCAACA TTAACCTAGC AGATCCCAAT ACCCGGATGC TTGACTTAAA TGGCGATGGA
AGGCCTGAAG TCTTAATTAC AGAAGACCAC GTATTTACCT GGTATGAATC AGTTGGCAGA
AAAGGTTTTA AACATAGCTG CAAAACGGTT AAACCATTTG ATGAAGAAGA AGGCCCTCAT
ATCGTATTTG CTGAGCCTAC ACAAACTATC TTTCTAGCAG ATATGTCAGG TGATGGAATG
TCTGATATTG TGCGGATTCG CAATAATGAA GTTTGTTATT GGCCTAACCT AGGCTATGGA
AAATTTGGCG CCAAAGTAAG TATGGACCAT GCTCCAGTAT TTGACCAACT AGGTGCCTTT
GATCCAGCTT ATTTAAGGTT AGCTGATATT GATGGTTCCG GCACCACGGA TATCATTTAT
TTAGGCAAGA ATACATTCAC CTGTTGGATG AACTTAAGCG GAAATGCCTT TAGTAGAACC
CCCTTTGAAA TAGATGCTTT TCCTGAAATT CACAACCAAT CCAAAATAAC TGTAACCGAT
ATATTGGGAA ATGGCGTTGC CTGCATCGTA TGGTCAAGTA ACCTGCCTAA AGATACTCAG
GCACCCTTGA AATACATTGA TTTGATGAGC AGTAAGAAAC CGCATATTAT GGTGGGTTAC
AAGAACAACT TAGGTAAAGA AGTTTCCTTG AAATACACTC CTTCCACTCA ATTTTACTTA
GAAGATAAAC GCGACGGAAA ACCCTGGGTA ACCAAGCTGC ATTTTCCTGT TCACTGCATC
TCCGAAATAG AAACAAGAGA TACGATTTCT GGTTATCGTT TTGTGAATAC TTATAAATAC
CATCACGGTT ATTATGACCA TGCGGAACGG GAATTCAGAG GCTTCGGGAT GGTAGAGCAA
ACCGATGCAG AGCATTTTGA ACATTGGGTA AAAGGCAATA ATAGTAATAT TGTTGACAAA
ACCCTTCATC AAGAACCTGT TATTACCAAG TCCTGGTTTC ATACTGGCGC ATTTCTAAGC
CGAGAAAGAA TTCTTAATCA ATTCGAACAC GAATACTGGT ATAAGGAAAT GATTCGGCAA
GGCTTTATTG ATGTAGTCAA TCATGAACAT TCTCTACCCG ATGCTCGCCT GATAGCTGCC
CCCGGATTAG ACAATTCCAT CATTAAGGAA CTAAGTGCCC AGGAATGGCA AGAAGCAGTA
CGCGCCTGCA AAAGCATGGC TTTACGTTCA GAAATTTTTG CCAAAGATGC GCCGCTGTCT
GGGGCTACTC CTGAACAAGT AAAAAGAGCG CTGACCCCTT ATTCTGTTGC TACGCATAAT
TGCGTGATTG AGCTCCTGCA ACCCAAAGGA CAGAATAAAC ATGCGGTATT TGTAGTAAAA
GAAAGCGAAG CGATTACCTA TAGTTATGAG CGGAATACAG CGGCCCCCCG TATTGCCCAT
AACCTGAACA TTCAACTGGA TGAATACGGC AACGTGCTGG AGTCCGCATC AGTAGTTTAT
CCCCGGTTGA TACCCAATAC TATTTTACCT TCAGAAACCC AACAAGAGCA GCGAAAACCC
ATCATCATCT ATACCCAAAA TAAGTTCACC AATGATAAGA TAGGAAACAA GTTAGCCAAT
GATAAGATAG AAGATGATAT GTATCGACTT CGGCTACCAT CCGAAGTGAA AACATTTCAA
TTGAAAGAGG TTAAAAAAGC AGGTACTTTT TACGCCGTGA GTGATTTTGA AAATATACTT
ACAGATGCCA AGTCGGATGT TGCGCTCTAT CATGAATTAG ACAAGCCTTT ATTAAAAGAT
CCTTTAACTG GAGAGGTAAT AAAAGCCCAA CGAAGACTTA TAGAGCACAT CCGCACTACT
TATTATAACA ACAACCTGAA AGAAGCCTTA CCGCTCCATA CCCTCGACTC TTTGGCCTTT
CCTTTTGAAA GCTATCAATT AGCCTATACA CCAGATTTAT TGAACGATAT TTTTCGTACA
AAAGTAGATG CCGCCCTGAT GGAGGAAGGC AAATTCACCC ATAGTGAAGG AGATAATAAC
TGGTGGATAC GCTCCGGCAC AACACAATTT ATCCAAGGAG CCGAAACTGC AAGCGATTCC
CAAAACCGTT TTTATGTACC TATTTCCTAT ACTGATCCTT ATGGAGCTAT CACTAAAGTA
AAGTATTACG GCAACTACTT CTTGTTTATT GAAGAAACAG AAGATGCATT AGGCAATAAG
ACCAAGGTGG ATGAGTTTAA TTTTCGTACT CTTTCACCCA AACGAATGCA AGATCCTAAT
GAGAATTTTT CGGAAGTACT GGTGGATGAA CTAGGTTTGG TAAAGGCTAT GGCGATTTGT
GGTAAAGTCC ACGAAGAAAA TAATGAAAAA GTTCATGAAT CTGATGACCT AGCTGGGTTA
AATGAGTTTA CAGATCCTGC TGAAAGTGCT TTAATCAGCA GTTTCTTGAC TGCACCAGCC
TCTAATATGC TGACCGCCCA TGGAAAAACT CTGTTGCAGC ACGCCACCGC CCGATTTGTC
TATGATTTTG ATGTCTATAA GCATACTGGA AAACCTGTAG TAGTAGCTTC TATTGTTCGA
GAAGAACACT TTAAGAAGAA AAATGATTCG CCTATTCAGC TTAGCTTTGA ATATTCCAAT
GGATTGGGAC AAGTGGTGAT GAGAAAAGTA CAGGCAGAAC TAGGACTAGC CAAGCAGGTT
ACCGTCCATG CTGATAATTC ATATTCGATT GATAAAATTA ATACTGCTAA GCTAAATCCT
CAGCAACTTC GCTGGATAGG TAATGGCAGA ACAGTACTGA ACAACAAAGG AAATCCCGTA
AAACAATACG AGCCTTATTT CTCTGTAACG CATCAATACG AAGACCTGAA GGAATTGGTG
GAAACAGGGG TTACACCGCT GCTGTATTAC GATGCCATGG GGCGAATGAT CAAAACAGAA
ATGCCAGATG GGACATTCAC CAAAACTGAA TTCGATTCCT GGCAACAAAG CATGTATGAC
CAGAATGATA CGGTATTGGA GTCTTCCTGG TACCATAAGC GTTTTAATCG CCTAATTGAT
GATAAATTAA AGGAGGCAGG CAAAGACCCT ATCAAAGAAA AGCAAGCAGC AGAAGCAGCA
GCCAAGCATG CGCATACACC CAATGTGCAG CACTTTGATA CGTTGGGTAG GCCAGTATTG
TCTATTGATC ATAACAAGAA AATTGACTCA GGGGATAACG ATCTTTGCTA TACCCACGTA
AAGTTAGATG CCGAAGGCAA TTTGCGAAGC ATAACCGATG ACCGTAAGAA TACAGTAATG
CAATACAAAT ATGATATGCT GGGCAGCATG GTCTATCAAA ACAGCATGGA TGCTGGGCAG
CGTTGGTTGC TTACTAATAT TATGGGAAAT CCTTTACGCA CCTGGGATGA TGAACGTAAC
CATGAGTTTC AGTATTTCTA TGATATCTTG CACCGCCCTA CCTCCAGCAA AGTGCTAGGT
GGAGATGGGA ATATAGCACT TAATCATATT TTTGACAGGA TTTTTTATGG AGATGAGAAA
AGTGAGTCTA ATGCTGAATT GAGAAATGTG AGAGGCCGGA TCGTTCGCCA CTATGACACA
GGTGGTTTAA TACATACTCC ATCATATGAC TTCAAAGGAC AACCGCCTTT GACTACCAGA
AAAGTATTTA GGAAATACAA AGAAGTAGCT AACTGGATAG ATGCCAACCT AGCTACTGAT
CTAGAAGCCG ACAGCTATGA TTTCACTACA GAAACGGATG CATTGGGCAG AATTACCCGA
CAAACAGCTC CTGATGGAAG CATCATTACT CCTTCCTATA ATGAAGCAGG CTTACTCAAT
AGTGAAAGTG TTACCCATGC CAATCCTGCC CTTACTACTA CCTATATCAA AGACATAGAC
TACAACGAAA AAGGCCAACG CAATAAGATT ATCTATGGAA ATGACGTAAC AACCAAATTT
TATTATGACG AAGAAACCTT CCGGATCACA CGATTAGAAA GCAAACGGAA AAACAACGAC
CCGCTGCAGG ATTGGTATTA TACGTACGAT CCGGTAGGTA ATATTACCCA TATTGAAGAT
AAAAACATCC CAGTGGTATT TTTTAATAAC CAAAAAATAA CGGGTATTTC GTCCTATACG
TATGATGCCC TCTATCGCCT GGTGGAAGCC ACCGGCCGGG AAAATAATGC TGCCTTGACC
TTTGGTAGCC AAGACAACTG GAACGATGCC CCTTTTAAGC ATCAAGTCAA TGTTGGTGAC
CCGATAGCAG TACGCAACTA TACCCAACGC TATCAATATG ACCCAGTGGG AAATATCCTA
CAAATGAAAC ATGTTGCCTG TGGCAATAAC TGGACAAGAA ATTATACCTA CGAAGCCATG
AACAATAGGC TTATCCGTAC CCAAGTAGGC TCACAAGTAT GTTCAGAAGC AAACTTAGTA
GAATGTCCAG AAATATGCTC AGAAGTCAGC CTAGAAGTAA TTTCAGGGGC TTATACTTAT
CCTCACCATG CTCAACATGG CTATATGATT GCTATGCCAC ATTTGGAAGA TATGGGCTGG
AATTTTAAAG AGGAAGTAGT CAAAACCATT CGTCAACGCC GAACCAATGG AGGTACTCCT
GAGACCACTT ATTATCAGTA CGATGGCCAA GGGCAACGAA TAAGAAAATT AACTGAAAAT
CAAGCGGATG CTGGAGCTAT CCCTACCAAA AAAGAAGAGC GGATTTATAT AGCAGGCTAC
GAGATCTACA AAAAACATAG TAACACCCAT GCAGGCTTAG AACGAACTAG TTTGAGCCTC
ATGGATGAAG GCCATCGCTT TGTAATGATA GAAACTCGTA ACGATATAGA CGACGGTACG
GAAAAACATC TAGTACGCTA CCAATTGCAT AACCATTTAG GTTCTGCAGC CTTAGAATTA
GACGATAGTG CCCAGGTAAT CAGTTATGAA GAATACCACC CCTATGGCAC CACTGCCTAC
CAGGCCAACA ACGCTGCCAT TAAAGCTGCC GCCAAGCGCT ACCGCTATAC GGGTATGGAG
CGGGATGAGG AAACAGGTTT GGAGTACCAT AGTGCACGCT ATTATGTGCC ATGGTTGGGT
AGGTGGTGTA GTGCAGATCC TATTGGGATT GGGGATGGGG TAAATGTGTA TAGATATGTC
GGTAATAACC CTGTGAACTT GCATGACCCA ACAGGAGCGT TAGAATTTGA AAATTATGAT
GCCTATAAAG CTTATGTAGG AAATAAAGCT TTATCTGCTG ACAAAATTGG AAGCCAGGGT
CATTGGTTGA AAAGTGATAG AGAAAACAAA ACGGATGTTT GGAGCGTAGC TAATACATTT
AATCTTCAGC AAAAAGATGG CAACTTACAA TATACTACAA TTACACAAAG AGTAGCTTTT
TACGGTTGGT TTCAGAAGCA AATTGAAGCA AAAGGTTTTG AAACAAAATG GGCAGGCGCT
GCCTATATAA TTGCACAGCA AATGTCATTA ATGGATGACA AGCTAGTAGC TTCATTAACA
GATGATCAAA TAATTAAATT TGCAAATGAG GGGAATAAAG CGATTTTTGA TGATGTGTTT
GATAATTTAA GAGATCTGTA CAATGGTCCA GTTCTCAAAG GAGACGCAGC CAGAAAGTGG
AATGAAGCTA CTTTAACCCA CGAACAAAGA GATGTTGTGC AACCTATATA TGCACGGCAG
ACTCCTGAAA CTATTAAAAC CTTACAGTCA TTAGCAGAGG GTACAGGCTG GAAAGCGACA
TTGGGTTTAA TTTTTGATAG AAGGTTTCCA ATAGGCGGGC CATTAAAATT TTCAGGTGAT
ATAAGTAATT GGCAAGATAG GTATGCCCAT GGAATGAACA AAGCTGTGCC GTTTTATAAT
AAATATGGTA GTTTGTTTAA TTGGAACAAG CCAGGCGATG ATAGGTTAGA CTCAGTTTTT
GACCCAGACA ATCCTAGTTT ACGGATAAAA GGCAACAAAT TATAG
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| Protein sequence | MNKELENQTS SSQSQFLKTD RGKTKSNTIE IPSIALPKGG GAIKGIDEKF SVNAVNGTAS
FTIPLPFSQA RSVTPSLSLA YNSGGGNGVF GLGWAMGLAS IKRKTDKELP QYFDAIESDT
FLFSEAEDLV PVYKKEYKKE TDGSLSKDAD GNYIIYFIKD AKGNYVIDEK DSLDRSYTIR
FYKPRIEGLF AHIEKWTHKS SREIKWRVIT RENVTTLFGW SVNSRIADPN DMNRVFEWLP
EFVFDDKGNC SQYIYKKEDK AGFDHAQLHN CNRFQNEHIT YTNLYLEKIL YGNKTPYKSF
HDPYPKETDY LFQTLFDYGE YNPDAPYNKI KEWDFRKDAF SDYKPGFEIR TARLCKRVLL
FHHFDELHGG SALVRSLNFE YDTATEESFT FLKSITAFGY IKQATGNYTH KHLPATEFIY
QKHEWNPTLK TISFDDIVHA PSGLDEPSYQ FIDLFNEGLS GILTEQGEGW YYKHNLGGGK
FEQAKLVAPK PSFAGLGNSL QLMDLDADGG KQLVSLSSEP KGFFELNDEE EWQPFRSFDN
LPNINLADPN TRMLDLNGDG RPEVLITEDH VFTWYESVGR KGFKHSCKTV KPFDEEEGPH
IVFAEPTQTI FLADMSGDGM SDIVRIRNNE VCYWPNLGYG KFGAKVSMDH APVFDQLGAF
DPAYLRLADI DGSGTTDIIY LGKNTFTCWM NLSGNAFSRT PFEIDAFPEI HNQSKITVTD
ILGNGVACIV WSSNLPKDTQ APLKYIDLMS SKKPHIMVGY KNNLGKEVSL KYTPSTQFYL
EDKRDGKPWV TKLHFPVHCI SEIETRDTIS GYRFVNTYKY HHGYYDHAER EFRGFGMVEQ
TDAEHFEHWV KGNNSNIVDK TLHQEPVITK SWFHTGAFLS RERILNQFEH EYWYKEMIRQ
GFIDVVNHEH SLPDARLIAA PGLDNSIIKE LSAQEWQEAV RACKSMALRS EIFAKDAPLS
GATPEQVKRA LTPYSVATHN CVIELLQPKG QNKHAVFVVK ESEAITYSYE RNTAAPRIAH
NLNIQLDEYG NVLESASVVY PRLIPNTILP SETQQEQRKP IIIYTQNKFT NDKIGNKLAN
DKIEDDMYRL RLPSEVKTFQ LKEVKKAGTF YAVSDFENIL TDAKSDVALY HELDKPLLKD
PLTGEVIKAQ RRLIEHIRTT YYNNNLKEAL PLHTLDSLAF PFESYQLAYT PDLLNDIFRT
KVDAALMEEG KFTHSEGDNN WWIRSGTTQF IQGAETASDS QNRFYVPISY TDPYGAITKV
KYYGNYFLFI EETEDALGNK TKVDEFNFRT LSPKRMQDPN ENFSEVLVDE LGLVKAMAIC
GKVHEENNEK VHESDDLAGL NEFTDPAESA LISSFLTAPA SNMLTAHGKT LLQHATARFV
YDFDVYKHTG KPVVVASIVR EEHFKKKNDS PIQLSFEYSN GLGQVVMRKV QAELGLAKQV
TVHADNSYSI DKINTAKLNP QQLRWIGNGR TVLNNKGNPV KQYEPYFSVT HQYEDLKELV
ETGVTPLLYY DAMGRMIKTE MPDGTFTKTE FDSWQQSMYD QNDTVLESSW YHKRFNRLID
DKLKEAGKDP IKEKQAAEAA AKHAHTPNVQ HFDTLGRPVL SIDHNKKIDS GDNDLCYTHV
KLDAEGNLRS ITDDRKNTVM QYKYDMLGSM VYQNSMDAGQ RWLLTNIMGN PLRTWDDERN
HEFQYFYDIL HRPTSSKVLG GDGNIALNHI FDRIFYGDEK SESNAELRNV RGRIVRHYDT
GGLIHTPSYD FKGQPPLTTR KVFRKYKEVA NWIDANLATD LEADSYDFTT ETDALGRITR
QTAPDGSIIT PSYNEAGLLN SESVTHANPA LTTTYIKDID YNEKGQRNKI IYGNDVTTKF
YYDEETFRIT RLESKRKNND PLQDWYYTYD PVGNITHIED KNIPVVFFNN QKITGISSYT
YDALYRLVEA TGRENNAALT FGSQDNWNDA PFKHQVNVGD PIAVRNYTQR YQYDPVGNIL
QMKHVACGNN WTRNYTYEAM NNRLIRTQVG SQVCSEANLV ECPEICSEVS LEVISGAYTY
PHHAQHGYMI AMPHLEDMGW NFKEEVVKTI RQRRTNGGTP ETTYYQYDGQ GQRIRKLTEN
QADAGAIPTK KEERIYIAGY EIYKKHSNTH AGLERTSLSL MDEGHRFVMI ETRNDIDDGT
EKHLVRYQLH NHLGSAALEL DDSAQVISYE EYHPYGTTAY QANNAAIKAA AKRYRYTGME
RDEETGLEYH SARYYVPWLG RWCSADPIGI GDGVNVYRYV GNNPVNLHDP TGALEFENYD
AYKAYVGNKA LSADKIGSQG HWLKSDRENK TDVWSVANTF NLQQKDGNLQ YTTITQRVAF
YGWFQKQIEA KGFETKWAGA AYIIAQQMSL MDDKLVASLT DDQIIKFANE GNKAIFDDVF
DNLRDLYNGP VLKGDAARKW NEATLTHEQR DVVQPIYARQ TPETIKTLQS LAEGTGWKAT
LGLIFDRRFP IGGPLKFSGD ISNWQDRYAH GMNKAVPFYN KYGSLFNWNK PGDDRLDSVF
DPDNPSLRIK GNKL
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