Gene Aasi_1306 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAasi_1306 
Symbol 
ID6377471 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Amoebophilus asiaticus 5a2 
KingdomBacteria 
Replicon accessionNC_010830 
Strand
Start bp1667553 
End bp1668380 
Gene Length828 bp 
Protein Length275 aa 
Translation table11 
GC content33% 
IMG OID642682392 
Producthypothetical protein 
Protein accessionYP_001958347 
Protein GI189502630 
COG category[S] Function unknown 
COG ID[COG5464] Uncharacterized conserved protein 
TIGRFAM ID[TIGR01784] conserved hypothetical protein (putative transposase or invertase) 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATGTCT TTAAAAGGCG GCATTTCAAA TATGATATAA TCATATGGGC AGTAAGATGG 
TATTGTAAAT ACGGGATAAG TTATCCTGAT TTAGCAGAAA TGCTTTATGT ATATACGTTA
ATAGAGAACC AGAGTACCCA TAATAAACTG ATGGCTTTTA GTATGCTATC CTACAATGTG
GCACTTATGG AACAACACTT GAATGAGGGG TACCAGGAGT TACCTATCAT TGTTAACATA
TGTATATATA CTGGTAAAAA AAGTCCTTAT CCATATTCAC AAGACATTTG CGATTATTTT
GAAGGCGTAG AACTAGCTAG AGAGCAGATG TTTAAGCATT TTAAACTTCT GGACTTAAGT
GTCTTATCCC AAGAAGAATT ACTAAAAGAT GGAACGTTTG GATCAGTGGA AGCATTGCTT
AGACAGGGTA GGGAGCGGGA CTATTTGAAT TGGATAAATA ATAATCAAGT ATTAATTTGG
GAGTTAGTGA GTAATTATGG ATTAAGTATA GTAATTTATA TACTCACAAC CGATGATAAG
AATGATGCTG ATTATCTTAT GCAAGCAATA ATAGAAGCAG TACTAGAACA AAAAGAAATT
ATTGTGACAG CCGCACAACA ATTAAGACAA GTAGATATAC AAACAGGACT TATAAAAGGC
ATCAAGGAAG GTATCGAACA AGGTAAGGAA GAAGGTGTTA AGTTAGGTAT ACAAGCTAAA
GCACAAGCTA TCGATAAAAG TATGCTTAAA GAAGGACTTG AAATTAGTTT AATTCAGAAA
GTAACAGGGA TTAGTAGAGA AGCTATAGAA AAGCTTACAA AAGAATAA
 
Protein sequence
MNVFKRRHFK YDIIIWAVRW YCKYGISYPD LAEMLYVYTL IENQSTHNKL MAFSMLSYNV 
ALMEQHLNEG YQELPIIVNI CIYTGKKSPY PYSQDICDYF EGVELAREQM FKHFKLLDLS
VLSQEELLKD GTFGSVEALL RQGRERDYLN WINNNQVLIW ELVSNYGLSI VIYILTTDDK
NDADYLMQAI IEAVLEQKEI IVTAAQQLRQ VDIQTGLIKG IKEGIEQGKE EGVKLGIQAK
AQAIDKSMLK EGLEISLIQK VTGISREAIE KLTKE