Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Aasi_1292 |
Symbol | |
ID | 6377446 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Amoebophilus asiaticus 5a2 |
Kingdom | Bacteria |
Replicon accession | NC_010830 |
Strand | - |
Start bp | 1652892 |
End bp | 1654580 |
Gene Length | 1689 bp |
Protein Length | 562 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 642682380 |
Product | hypothetical protein |
Protein accession | YP_001958335 |
Protein GI | 189502618 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
| |
Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.340896 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAACTTTA ATTCATTCCA GCGATTTGTT GCTCGTATTT TACTTATAAG CTTATGCTTA CAAAGTTGTG GAGGGAAATT CGGCAATAAT CCACTTATTC CTACCGGGGA AGAACAAACA GCGCCTATAC AAACTAATAC ACAAGCCATT ATTCCTCTAA CTAATATCCA ACCTTTAATA GATAAACAAT TGACAGCACA AGGTGGGCAT GCAGTTACAT TGTACGAGGA TAAAGGGCAG CTCCAGGCCA GTGTAGAAAT AGTAGATGAA AAAAATAAGG TTTTTAATGG GATATCTGTA TCCATAGAAA AGGGGACAGA TTTAAGAAGT TTAGCACACT TACCTAAAAG AATTCAGCAA TATCGCATCC AAGTAGAATT TGATGAAAAG GGGACGCCAG TTAAAATAGG TATACATAAA CCATGGTTAA TGGGAGGGGG CAAAAGTGAA GATGAAAAAG AAGATAAAGT AAAATTAATA GATCAAGGAG AAGAAGAGTG GGAAAAAGGG GAAATAGATG ATGAAGAAAG AGAGCCTACC TATGAAGAAT GGATAAACAA TGAACGTGAT GAACCCCAAA GAAAGCAAGA AAGAAGAAAA TACGAGGAAT TAGAAGATAC TTCAGAGAAA TTTGAATTAG TTAAGCGAAG AAAAACAACA AGTGTGAGAA ATTCGCTGTT AACAGTAAGA AAGACACCAT TCAGAGAACA AGAAGGAGAA GACATCAATA GTCAAATCCA ATTGAGTAAA ATAATTTTTG AGGATGCAAG ATTATTGTTA GAACGTGCAG CAAGGTATGG ACATACACTA GCTATTGATT TGTTAAAGAG ACTAGCACAT CTCAATTATT TTGGAGCAGA AGCTACAAAT TTAGGGAATT TTATAATCCT CCCACCAGAA TTACGGTTAC ATATCTTATC GTATGTAGGG TTTCCTGGAG TACTAATGGT CAAACAAGTT AATAGGAGTT TTAATAATTT AATCACCAGC TATGATCAAG TTAGCTTGGT TGGTGTAGAA AATAGGCCTC GATGGACCAT CGGCAAAAAA TCCTGTATGA TAAACAAGAT TATAGATTTT AGTAGATTAA CTTTTACCTC TGAAACGATT CTTAGCTTTC CTTTTTATCA GTTAATGGGA AAAGTAGAAA ATCTTCCACA AGAATTCTGG CCTTATCTTA AAGATACACA AATTCATACA GTTAGTTTAA AACAAATAGG AAATGTAGAG GCTATAGAAT TGGCTAAGCA CTTACAAGGA ACGAGTGTTC ATACGGTTGA TTTAAGCTTT AATGAAATAG GGGGTTTAGT GGCAGTAGAA TTGGCTAAAT GCTTACAAGG TACTAATGTA AAAGAAATTA ATTTAAATTG GACCCAAACA CACATAGGAG ATTTTAAGCC AGGGGAGTTT GCTCAAGCTT TACAGGGAAC AAATGTACAT ATAGTGCATT TAAGAGAGAA TTTTATAGAT ATCTCAGGAG CCGTGGAATT CGCCAGGAAT TTACAAGGAA CGCATGTTCA TACGGCTGAC TTAAGTGGGA ATTTAATAGT CAATGAGGGA GCATTACAAT TTGCTCAATC CTTACAGGGA ACAAAAGTAC ATACAGTTGT TTTAGATGGA GAGCTTATAG CAGCTGAAAC TAAGAGGCTA TTGAAAGAAC AATATCCGCA TATTAAGTGG GAGTTTTAG
|
Protein sequence | MNFNSFQRFV ARILLISLCL QSCGGKFGNN PLIPTGEEQT APIQTNTQAI IPLTNIQPLI DKQLTAQGGH AVTLYEDKGQ LQASVEIVDE KNKVFNGISV SIEKGTDLRS LAHLPKRIQQ YRIQVEFDEK GTPVKIGIHK PWLMGGGKSE DEKEDKVKLI DQGEEEWEKG EIDDEEREPT YEEWINNERD EPQRKQERRK YEELEDTSEK FELVKRRKTT SVRNSLLTVR KTPFREQEGE DINSQIQLSK IIFEDARLLL ERAARYGHTL AIDLLKRLAH LNYFGAEATN LGNFIILPPE LRLHILSYVG FPGVLMVKQV NRSFNNLITS YDQVSLVGVE NRPRWTIGKK SCMINKIIDF SRLTFTSETI LSFPFYQLMG KVENLPQEFW PYLKDTQIHT VSLKQIGNVE AIELAKHLQG TSVHTVDLSF NEIGGLVAVE LAKCLQGTNV KEINLNWTQT HIGDFKPGEF AQALQGTNVH IVHLRENFID ISGAVEFARN LQGTHVHTAD LSGNLIVNEG ALQFAQSLQG TKVHTVVLDG ELIAAETKRL LKEQYPHIKW EF
|
| |