Gene Aasi_1095 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAasi_1095 
Symbol 
ID6376651 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Amoebophilus asiaticus 5a2 
KingdomBacteria 
Replicon accessionNC_010830 
Strand
Start bp1409391 
End bp1410278 
Gene Length888 bp 
Protein Length295 aa 
Translation table11 
GC content33% 
IMG OID642682207 
Producthypothetical protein 
Protein accessionYP_001958167 
Protein GI189502450 
COG category[S] Function unknown 
COG ID[COG1295] Predicted membrane protein 
TIGRFAM ID[TIGR00765] YihY family protein (not ribonuclease BN) 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.377246 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTATACTG GATATTTTAG ACGATGTATT AGTAAAAACA GTCATTATTG TTCAATCCTT 
CTACAAATTT TTAAAGAATT ATGGCATAGA ATACTAGCAA ACGATATATT AGAACGGTCC
TATGCAGTAG CGTTCAACTT TACTTTAGCC ATATTTCCTG CTACCATATT TATCTTTACA
CTCATACCTT ATATTTCTAT TCCTGAATTA GTCCCCAAGC TTATTGACTT TTTTAAAGAA
GGGATACCAG AAACAATATA TGGAGCCCTG GCACCTACCA TACAAGATAC ACTTAGCAAA
CATAGAAGTG GATTGTTATC TTTTGGATTT ATCTACTCAC TATACCTTTC TAGCAACGGA
ATAATGTCTC TAATAAAAAA TTTCAATTTA GTTGATCAAC CTATGTCACA CTATAAACGT
AGCTATTTGC AACAAAGAGC TATTGCAACC ATACTTACTT TAGCACTTAT GTTAGCACTT
TTTAGTAGTA TATTACTACT AATAGTAGCT CGGCAAATAC TAGACTATAT GGTTAATTAC
GAGTTAATCA CCCACAAAGT ACACATTAGC ATACTCCCAT TTGCAAGCTC CATTATTGTA
TTTTTAATAT TTTTTATAGC CATTGCAGGC ATATATTATC TAGCACCTAC CAATAAGCAA
AATAGAAAAT TTATACTAAT AGGAGCCTTA ATAGCCACGT TAGGATGTTT ATTAGCATCG
CTCGCATTCT CCTATTATGT TAATCATTTC GTAAAGTATG GGCTGTACGG CTCTTTGGGT
GTCATGATTG CTTTAATGCT TTGGTTATTT CTCTTATCTC TAACATTGCT AATAGGATTT
GAACTGAATA TTACCTTAAC CAGAATACTG GGCACTTCTA AACAATAA
 
Protein sequence
MYTGYFRRCI SKNSHYCSIL LQIFKELWHR ILANDILERS YAVAFNFTLA IFPATIFIFT 
LIPYISIPEL VPKLIDFFKE GIPETIYGAL APTIQDTLSK HRSGLLSFGF IYSLYLSSNG
IMSLIKNFNL VDQPMSHYKR SYLQQRAIAT ILTLALMLAL FSSILLLIVA RQILDYMVNY
ELITHKVHIS ILPFASSIIV FLIFFIAIAG IYYLAPTNKQ NRKFILIGAL IATLGCLLAS
LAFSYYVNHF VKYGLYGSLG VMIALMLWLF LLSLTLLIGF ELNITLTRIL GTSKQ