| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aasi_0909 |
|---|
| Symbol | |
|---|
| ID | 6376905 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Candidatus Amoebophilus asiaticus 5a2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010830 |
|---|
| Strand | + |
|---|
| Start bp | 1155617 |
|---|
| End bp | 1158214 |
|---|
| Gene Length | 2598 bp |
|---|
| Protein Length | 865 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 34% |
|---|
| IMG OID | 642682044 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001958005 |
|---|
| Protein GI | 189502288 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0666] FOG: Ankyrin repeat |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.122525 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTTTCCA AAAAAGTGCC TATTAAAAGG TCCTTATTTC CATTTTTACG GTTACTTCTT
AGCCTGCTTG TATTATACAA TATCATAGCC TGTGGCTGCG GAAAATCTCA TAAGCATAAT
AAAAACAACA AAGGTGAACC AAACCAAGAT ATAGCTTCTA CTAATCAAGA CCGTGACAGG
CGCTTAAATA TGGAAGTATT TCCTATAAGG TTAGATGGGA ATAATAAACA AGTCACAGCT
ACATTTATAC TAACAGATAA TGATAAGGTA GTAGATTTAA AACAATATAA ATTAAGAGTA
AAGTTAGTAG AAAGCGGCAG TACCATAAAC TATAAAGATG GCAGCAATAC ACTAAGAATT
ATAACTGATA AAGTAGAAAA AAATTTAACT CATTTTTTTT CAATAGCCGA ACTTAAGCCT
AATGAAGCAC CATTAAAACT CTCTTTTGAT ATTGTTCCTA GTACAGAAGC TACTTCTGTA
AGTATAGTAT TCAAGTTGTT CGATAAGGAT AGTGCTAAGC TAAAAGAGTA CCCTATTAGC
TGGAACAAGG AAGCAGCAAG GTCCGGAGGA TTAAAAATTA ATAAGTTAGC CTATGAGCAA
GCTAACAGTA GGGTTGTCTG TAGTATACAG AACAATAGCA AAGAATTGGT TAAGGATGTT
CAATTGCGTT ATACCAATAT CAGCCAAGAT ACTATTGGTA AGACCGTTGT GCTGGACAAC
CAACAGGTAG GAGTTGTCAA CTTTACAAGT ATAGCTCCAC AGGGTTTAAC AGAAGACCAA
ATTTTGCCTA TAGACTTTAA ATCAGCTATT AAAGCTACAT TTAGGTTTGA AGTGTTACAT
CAAGGCAAAG TAGTAGAAAA TGCAGTGGAA GAAAAAGAAT TTGATTATAA AGAAGCTCTG
TTAAAGTTAG TAGCAGTTGG ACCTACCTCA TTAATTGGAA AAGATAAGAC AATTCGGTTA
AGGATAGAAA AGGAAGCTAG TAGTAGTAAT ATAGACGTTA GCAAGCTAGA ATTAAGGCTC
ATACAGCATA CAACAAGTGA TGCATACCTA GACTATAATG GAAAAGCTAG TATAGTAGTA
CCAGGTAGTG AGTTAAATAT TACAGGCGAT AATATAATTC TTGTTATCCA ACCCTCTACT
GCTGTACAAG CATCATTTGA ATTACACCTA GTGTACGCAC CTCGTGTATT AGATAAACAA
CCATTTACAT GGCGAATGGA TGGCGCCCAA GCTAATAAGA TGCTTTTGGA AGCTGCAGCA
GCAGGTAACG AGAAAAAAAT CGAGGAATTG TTACAAATTC CAGAGATTGA TATAAATATT
AAAAATGAGA ATGAGGAAAC TCCTTTGCAT GAGGCTGCTA AAAGTAACAA TTCAGCAGTT
ATTAAATTAC TCTTAGACCA GGAAAATATT CAAGTAAATC ACAAAGATAA ACAAGGGTAT
ACACCATTAA GTATCGCAGT TGAACAAAAT AGCAGATTGG CTACTTTAGC CCTGTTGCAA
GTAGAAGGAA TTGATATAAA TACAAAAAAT AAATGGGGTA ATAGCCCTCT TCATTTAGCA
ATTCAAAAAG ATAACCAAGA ATTAGTTGAA GATTTAATAG CTAAAGGAGC CAATGTAAAC
GCTACCAATA ATTATGGTAT TACCCCTTTG CACATAGCTA CTAAAGTAGC TAATACAAGA
AATGTCGCAT TGTTGTTAGC CGAAGGAGCT AATATAAATA GGATGGATGA AAAGGGAAAT
ACGTCTTTAC ATATAGCTGT TGAAAAAGGA AAAGAGCAAG TGCTAGAGCT ACTATTAGCT
ACCAGAGCAA ATGTAAAAAT GATAGATAAA CGTGGACTTA CTCCACTACA TAAAGCTGCT
TTAGCAAGCA ATAAATTAGC AATCCAAGCA TTATTAGCTA GAAAAGCAGA GGTAAATGCT
GAGGATATGC ATGGTAATAC TCCTCTTCAT AAAGCAGTTG AAAAAGGAGA TAAAGAAGCT
ATACAAGCTT TATTAGCAGT AAAAGAGATT AAATTATATG CAAAAGATAA TGATGGTAAT
ACTCCATTAC ATATAGCAGT TTTAAAAGGC AATGAGGAAG CAGTTACAGC TTTATTAGAT
AAAGGTGTAA AGGTAAATGT TAAAGATAAA TATAATAATA TGCCTTTGCA TATAGCCGCA
CAAAAAGGTA ATGTGTCAAT TATTAAAAAA CTCATAAAAA AGAGAGAAGG TATAAATGCT
AAAGATGCTA TGGGTTACAC GCCGTTACAT ATGGCTATCT ATTATGATCA TCCAGCAATT
GTTGAATTGC TACTTAAAAA GCAAGCCAGG CGAGATATAA AGGATGCACA AGGAGAGACA
GTAGTTGATC TGGTTCGGCG ATCTACCAAT GAGGAAATAA AAAGATTATT TGCTAAAAAT
AGGGAAGGCC TAAATGATAA AGATGCTATG GGTTACACGC CAGCTACTTA TCATGATCAT
CCAGCAATTG ACAAATTGTT ACCTAAAAAG CAAGCTGATC GAAATATAAA GGATGAACAA
GAAGAAACAG AAGTTGACCT GGTTTGGCGA TCTGTCAATG AAGAAATGGA AGGATTATTT
GGTATTACAA CTCCTTAA
|
|---|
| Protein sequence | MLSKKVPIKR SLFPFLRLLL SLLVLYNIIA CGCGKSHKHN KNNKGEPNQD IASTNQDRDR
RLNMEVFPIR LDGNNKQVTA TFILTDNDKV VDLKQYKLRV KLVESGSTIN YKDGSNTLRI
ITDKVEKNLT HFFSIAELKP NEAPLKLSFD IVPSTEATSV SIVFKLFDKD SAKLKEYPIS
WNKEAARSGG LKINKLAYEQ ANSRVVCSIQ NNSKELVKDV QLRYTNISQD TIGKTVVLDN
QQVGVVNFTS IAPQGLTEDQ ILPIDFKSAI KATFRFEVLH QGKVVENAVE EKEFDYKEAL
LKLVAVGPTS LIGKDKTIRL RIEKEASSSN IDVSKLELRL IQHTTSDAYL DYNGKASIVV
PGSELNITGD NIILVIQPST AVQASFELHL VYAPRVLDKQ PFTWRMDGAQ ANKMLLEAAA
AGNEKKIEEL LQIPEIDINI KNENEETPLH EAAKSNNSAV IKLLLDQENI QVNHKDKQGY
TPLSIAVEQN SRLATLALLQ VEGIDINTKN KWGNSPLHLA IQKDNQELVE DLIAKGANVN
ATNNYGITPL HIATKVANTR NVALLLAEGA NINRMDEKGN TSLHIAVEKG KEQVLELLLA
TRANVKMIDK RGLTPLHKAA LASNKLAIQA LLARKAEVNA EDMHGNTPLH KAVEKGDKEA
IQALLAVKEI KLYAKDNDGN TPLHIAVLKG NEEAVTALLD KGVKVNVKDK YNNMPLHIAA
QKGNVSIIKK LIKKREGINA KDAMGYTPLH MAIYYDHPAI VELLLKKQAR RDIKDAQGET
VVDLVRRSTN EEIKRLFAKN REGLNDKDAM GYTPATYHDH PAIDKLLPKK QADRNIKDEQ
EETEVDLVWR SVNEEMEGLF GITTP
|
|---|
| |