| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aasi_0824 |
|---|
| Symbol | |
|---|
| ID | 6376981 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Candidatus Amoebophilus asiaticus 5a2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010830 |
|---|
| Strand | + |
|---|
| Start bp | 1044230 |
|---|
| End bp | 1044988 |
|---|
| Gene Length | 759 bp |
|---|
| Protein Length | 252 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 34% |
|---|
| IMG OID | 642681964 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001957926 |
|---|
| Protein GI | 189502209 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 0.668362 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGATCTAA CGGTTAGGAA GGAGAGTGGC TTTAGTTATA TTGAAGAAGG CCAAGGAGAA
ATACTTTTGC TTTTACATGG CCTTTTTGGT GCCTTAAGCA ACTGGGGTCA TGTTGTAGCA
TATTTTTCTA AAAGTTATAG GGTTATTATT CCTCTAATCC CTATCTATGA AATGCCTTTA
AAGAAGGCAA ATATGGATGG GTTAGTAGAA TTTATAGATA CATTTATTCA AAGTAAAAAG
CTTGAAAAAT TTACGCTAGT AGGCAACTCA TTAGGCGGAC ATATTGCTCT CATCTATACT
TTGGAAAATC CCGCTAAAGT TTCTAGACTA ATACTTACAG GTAGTTCAGG GTTATATGAG
AATACAATGG GAGCTTCTTT TATTAAAAGG AACAATTATA ACTATATAGC AGAACGAGTA
AGGTATACTT TCTATGACCC TGAAATAGTT ACAGAAGAAT ATATTAATGA AGTTTTTAAT
CTAGTGCAAG ATAGTAATAG GGTTCTTCGG ATAGTTGCAA TTGCCAAGTC TGCACAACGC
CATAACTTGG CTGATAGGCT CCCTGAAATT AAAATCAATA CACTATTGAT CTGGGGACTA
AATGATACTA TTACACCTCC CTTAGTAGCA CACGAGTTTA ATACCTTAAT ACCTAATAGT
TTTTTACAGT TTATCGATAA GTGTTGCCAC GCACCTATGA TGGAGCATCC AGATAAATTC
AATCAGATTA TGAACCAATT TCTAATAGCT AAAACTTAA
|
|---|
| Protein sequence | MDLTVRKESG FSYIEEGQGE ILLLLHGLFG ALSNWGHVVA YFSKSYRVII PLIPIYEMPL
KKANMDGLVE FIDTFIQSKK LEKFTLVGNS LGGHIALIYT LENPAKVSRL ILTGSSGLYE
NTMGASFIKR NNYNYIAERV RYTFYDPEIV TEEYINEVFN LVQDSNRVLR IVAIAKSAQR
HNLADRLPEI KINTLLIWGL NDTITPPLVA HEFNTLIPNS FLQFIDKCCH APMMEHPDKF
NQIMNQFLIA KT
|
|---|
| |