| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aasi_0806 |
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| Symbol | secA |
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| ID | 6377012 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Amoebophilus asiaticus 5a2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010830 |
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| Strand | + |
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| Start bp | 1021204 |
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| End bp | 1024554 |
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| Gene Length | 3351 bp |
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| Protein Length | 1116 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 642681948 |
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| Product | preprotein translocase subunit SecA |
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| Protein accession | YP_001957911 |
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| Protein GI | 189502194 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0653] Preprotein translocase subunit SecA (ATPase, RNA helicase) |
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| TIGRFAM ID | [TIGR00963] preprotein translocase, SecA subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.211513 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTTAAAC TCTTTACTAA GCTGTTTGGT ACTAAATCTG AAAGGGACTT AAAGTCCATT
CGCCCCTATG TGGAAAAGAT TAATCTGGAA TATGAGAAAT TGGTATCTCT TACTAATGAT
GAGTTACGTA AAAAAACTGA CTCCCTAAAA CAATATATCA AAGTTGAGAC ACAAGAATTT
ATAGGAGAGC TTGAAATAAG AGAAAGGCAA CTAGAAGCTA CTACCCAGTT AACTCCAAAG
GAAGTAGAAG ATTTATACAT ACAAATCAGC CGTATTAAAG AGCAATATAA TACGCAGCTA
GAAAAAGTAT TATTGGACAT CTTGCCACAA GCATTTGCTA TTGTAAAGGA AACAGCCAGA
AGATTTAAAG AAAATGAACA GCTTATTGTA ACAGCAACTG GTTATGATAG AGAGTTGGCT
ATTACAGAGA AACATATTGA TATTGAAGGT GATCAAGCTA TTTGGAAAAA TCAGTGGGAA
GTAACAGGGC ATTTGCTTAC CTGGGACATG GTACATTATG ATGAGCAGCT CATAGGAGGT
GTTATTTTGC ACAAAGGTAA AATTGCAGAA ATGGCGACAG GTGAGGGTAA AACGCTAGTT
GCAACGCTAC CTACATTTTT AAATGCATTG GTAGGAAAAG GTGTACATAT TGTAACTGTT
AATGAATACC TAGCTAAACG TGATGCTGCT TGGATGAAGC CTATTTATCA ATTTCATGGA
TTTACTGTAG CGTGTATTGA AGAAACATCC CCTTATTCGG CAGCTAGAAG AGAAGCTTAT
CAGGCAGACA TTACTTATGG TACCAACAAT GAGTTTGGCT TTGATTACCT ACGCGATAAT
ATGGCTTCGC AACAAGAAGA GGTGGTACAG CGAGAACATC ATTACGCCAT TGTAGATGAG
GTAGATTCTG TTTTAATCGA TGATGCAAGG ACACCCCTTA TTATTTCAGG ACCAGTTGAA
AAAGGTAATG AGCAGGAATA TATAACCTTT AATCCACGTA TAAAGCGCCT TTATGAAGCA
CAAAAACAAA TTGTAAACCA ATTTTTACAA GAAGCTAAAA GCCAAATGGT GGCAGGAAAA
AACGACGAAG CAGGATTGCC ATTGTTTAGG GCTTATAGGG GGCTTCCTAA ATACAAGCCA
CTTATTAAGT ACTTGAGTGA GCCAGGAGTT AAGCAGTTGC TTCATAAGAC AGAGAATTAT
TATATACAAG ATAATTCTAG AATGATGCCA GAAGCAGACG AACCTCTTTT ATTTACCATA
GATGAAAAGC ATAATACTGT AGAATTAACT GAAAAAGGGT TAGAATATAT TACCCAGCAA
GGAGAAGATC CTGACTTTTT TATTTTACCG GATACAGCTA CTGCAGTAGG AGAAATAGAA
AGTGATGCTG GTTTAGATAA CCTTGAAAAA GAGCAAAAGA AACAAATACT CGCACAAGAA
TATGCTATCA AGTCGCAACG TATCCATGCA GTACAGCAAC TTCTAAAAGC TTATGCACTC
TTTGAAAAGG ATATAGATTA TATCCTAGTA GATGGTAAAG CAAAAATTGT AGATGAACAA
ACCGGACGAG TATTAGAAGG ACGCCGTTAT TCAGATGGCT TACACCAAGC TATAGAAGCA
AAAGAAGAAA TAAAGATTGA AAAAGCTTCT CAAACCTATG CTACCATTAC TTTGCAAAAC
TATTTCCGGC TTTACCATAA GCTAGCAGGT ATGACAGGTA CAGCTGAAAC AGAAGCAGGT
GAATTTTACG ATATTTATCA TTTAGATGTA GTAGTAACAC CTACGCATAA GCCTGTAGTC
CGGGAAGATA AGGATGATAA AGTATATAAA ACAGTCCGAG AAAAGTTTAA TGCTATTATT
GAAGAAATAA CTGTATTGGC TAATCAAGGA CGACCAGTGT TAGTAGGTAC CACTTCCGTG
GAAATTTCTG AATTGGTAAG TAAAATGCTT AATCTTCGAA AGATTAAACA CCAAGTTCTT
AATGCTAAAC ACCATCAGAA GGAAGCTGAA ATTGTGGCTG AAGCTGGAAA GCCTGGAACT
GTAACAATTG CTACTAATAT GGCTGGTAGG GGAACAGACA TTAAACTTAG CCCAGAAGCT
AAAGCAGCAG GTGGCTTGGC TATTATTGGT ACAGAAAGGC ATGAATCTCG TAGGGTAGAC
AGACAGCTTA GAGGACGTGC TGGTAGGCAA GGGGATGTGG GTTCTTCCCA ATTTTTTGTG
TCTTTAGAAG ATAGTCTTAT GCGCCTATTT ATTTCTGATA GGATTGCTAA AATTATGGAT
AGCTTAGGTC TTAAAGAAGG GGAGATGATA CAGCATAGTA TGATAACAAG ATCCATAGAA
AGGGCTCAGA AAAAGGTAGA GCAGAATAAC TATGCTTACC GTAAGCGTTT GTTGGAGTAT
GATAATGAGC TTAATAAACA GCGAGAAATC ATCTACAGAC GTAGAAGAGA TGCACTTTTG
GGGCATAGGC TAGGCGCAGA GGTAAATGCT ATGTTGTTTG AAGTAGCAAA GAGTTCAGTT
ATGCAACAAG GGGTAAAAGC AAATTATCAT GTGCTAGCAA CAAAATTCTC TTACATAACT
GGTACGCTAC CCCCCATCAC AGAAGAGGAG TTCCACACCT ACGATATACA AAAAATAACG
GATATTATTT ATCAGGCATT TTTATCTAGC TATATGAATA GACTGGCTGT ATTTAAGGAA
CAAGGCATAG CTGTACAGAT GAATCTACCA GATCATATAG CAGATATTAG AGCTGAATAT
TTATCCTTTA GCTTTTCAGA TAGTGAAAGA CGTTTAGAAG TACCAGTTAA AATAGCTGAC
TTTATGGATA ATGCAGGAGA AGCTATTTTG AAATCGTTAG AGAGGGTGGC CATTATCTAT
TACTTAGATC GATATTGGCA AGAGCATTTA CGTTACATGG ATGAACTTAG GCACTCTGTA
CAAAATGCAT CTTATGAACA GAAAGATCCG TTGCTTATAT ATAAATTTGA ATCGTATGCT
CTATTTTCTA CTATGATTGC CCGGGCAAAT GAATCAATTA TTACCTACTT ACTAAAAGCT
AACTTATTGC TCTATAAGGC GAGCGACGAG AAGCCTAAGA TGGTAGAGAA AAATAAAAGA
ATAGAACTAG AAGAAAGCAA ACAAGATATT ATAAGTTTAC TGAGAGAAAG GGCTAGCAAC
TCTTCTGAAG AAATATTAAA ACCTCAGCCT ATTAAGTCTC AAAAGATAGC TAACAGAAAT
GAGCGAGTAA CTGTGCAGTA TGAAGATGGG ACTATAAAAG AAAATGTTAA ATTCAAAAGT
GTAGAAGAAG ATATAGCTAA TGGAAAATGT ATATTGCTTG AAACAAGATA A
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| Protein sequence | MLKLFTKLFG TKSERDLKSI RPYVEKINLE YEKLVSLTND ELRKKTDSLK QYIKVETQEF
IGELEIRERQ LEATTQLTPK EVEDLYIQIS RIKEQYNTQL EKVLLDILPQ AFAIVKETAR
RFKENEQLIV TATGYDRELA ITEKHIDIEG DQAIWKNQWE VTGHLLTWDM VHYDEQLIGG
VILHKGKIAE MATGEGKTLV ATLPTFLNAL VGKGVHIVTV NEYLAKRDAA WMKPIYQFHG
FTVACIEETS PYSAARREAY QADITYGTNN EFGFDYLRDN MASQQEEVVQ REHHYAIVDE
VDSVLIDDAR TPLIISGPVE KGNEQEYITF NPRIKRLYEA QKQIVNQFLQ EAKSQMVAGK
NDEAGLPLFR AYRGLPKYKP LIKYLSEPGV KQLLHKTENY YIQDNSRMMP EADEPLLFTI
DEKHNTVELT EKGLEYITQQ GEDPDFFILP DTATAVGEIE SDAGLDNLEK EQKKQILAQE
YAIKSQRIHA VQQLLKAYAL FEKDIDYILV DGKAKIVDEQ TGRVLEGRRY SDGLHQAIEA
KEEIKIEKAS QTYATITLQN YFRLYHKLAG MTGTAETEAG EFYDIYHLDV VVTPTHKPVV
REDKDDKVYK TVREKFNAII EEITVLANQG RPVLVGTTSV EISELVSKML NLRKIKHQVL
NAKHHQKEAE IVAEAGKPGT VTIATNMAGR GTDIKLSPEA KAAGGLAIIG TERHESRRVD
RQLRGRAGRQ GDVGSSQFFV SLEDSLMRLF ISDRIAKIMD SLGLKEGEMI QHSMITRSIE
RAQKKVEQNN YAYRKRLLEY DNELNKQREI IYRRRRDALL GHRLGAEVNA MLFEVAKSSV
MQQGVKANYH VLATKFSYIT GTLPPITEEE FHTYDIQKIT DIIYQAFLSS YMNRLAVFKE
QGIAVQMNLP DHIADIRAEY LSFSFSDSER RLEVPVKIAD FMDNAGEAIL KSLERVAIIY
YLDRYWQEHL RYMDELRHSV QNASYEQKDP LLIYKFESYA LFSTMIARAN ESIITYLLKA
NLLLYKASDE KPKMVEKNKR IELEESKQDI ISLLRERASN SSEEILKPQP IKSQKIANRN
ERVTVQYEDG TIKENVKFKS VEEDIANGKC ILLETR
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