| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aasi_0766 |
|---|
| Symbol | |
|---|
| ID | 6376822 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Candidatus Amoebophilus asiaticus 5a2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010830 |
|---|
| Strand | - |
|---|
| Start bp | 977112 |
|---|
| End bp | 977645 |
|---|
| Gene Length | 534 bp |
|---|
| Protein Length | 177 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 642681912 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001957875 |
|---|
| Protein GI | 189502158 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0566] rRNA methylases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAAC TTAGTACCCA AGAACTCGGT AGGCTTTCCA CAAAAGAGTT TAAGAATGCT
CTTAAGATAC CGTTGATATT AGTGTTAGAT AATTTAAGAA GTATGCATAA TATAGGAGCA
GCTTTTCGTA TAGCAGATGC ATTCTTATTA GAGAAAATAT ATTTATGTGG CATCACAGCT
CAACCACCTC ACAGAGAAAT TCATAAAACA GCACTAGGTG CAGAAGAAAC GGTAATATGG
GAGTATGTGC CTGATACCTA TACTCTATTG CAATCCTTAA AGACTAAGGG ATATTTAATA
GTTGCTTTAG AACAGACGGA CGAAAGTATA CCTTTACAGA GTTATCAAAT CAACTCCAAT
AACAAGTGTG CTTTGGTATT TGGAAATGAG GTCTTTGGCA TTCAAGAAGA GGCCTTAGCC
GCTTGTGACC TTGCTTTAGA AATTCCTCAG CATGGTACCA AGCATTCTTT AAATGTTTCG
GTGAGCATGG GAATTGCAAT ATGGGAATTA ACAAAAGACA AATTTGGAGG TTAA
|
|---|
| Protein sequence | MKKLSTQELG RLSTKEFKNA LKIPLILVLD NLRSMHNIGA AFRIADAFLL EKIYLCGITA
QPPHREIHKT ALGAEETVIW EYVPDTYTLL QSLKTKGYLI VALEQTDESI PLQSYQINSN
NKCALVFGNE VFGIQEEALA ACDLALEIPQ HGTKHSLNVS VSMGIAIWEL TKDKFGG
|
|---|
| |