Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Aasi_0759 |
Symbol | |
ID | 6376884 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Amoebophilus asiaticus 5a2 |
Kingdom | Bacteria |
Replicon accession | NC_010830 |
Strand | + |
Start bp | 967050 |
End bp | 967745 |
Gene Length | 696 bp |
Protein Length | 231 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 642681905 |
Product | hypothetical protein |
Protein accession | YP_001957869 |
Protein GI | 189502152 |
COG category | [V] Defense mechanisms |
COG ID | [COG1136] ABC-type antimicrobial peptide transport system, ATPase component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
| |
Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGTGTAG TATTTACTAG TTTACTAACA GCTACGTCAA TTACTAAAAG CTATGGTAAA CTTCAAATCT TAAAAGGTAT TGACCTACAA GTAGCACAAG GAGAGATAGT AGCCATTATG GGGGCTTCTG GAGCTGGGAA AAGTACATTG CTACATATAC TGGCTACCTT AGATAAGCCA GATTCTGGCA CATTATACTT AGGACAGGAT GATCTTATAT CTCTTCGGGG CAATAAGTTA GCAGCATTTA GAAATCAGCA TATCGGTTTC ATCTTTCAAT CTCATAACCT TTTATCGGAG TTTACTGCTT TAGAAAATGT ATGCTTGCCT GGATATATTG GTAAGTTTGA TGAACGTTCA GTACGGGAAC GAGCTAAAGA GTTACTTGTG TTGTTAGGAT TAGAAGCACG TATGCAACAT AAGCCTACTA CCTTATCTGG AGGAGAGCAG CAAAGAGTGG CTGTAGCTCG TGCTCTTATT AATAATCCTC GTATCGTTTT TGCAGATGAG CCAAGTGGAA GCTTAGACTC AAGAAATGCA TTAGCGCTAC ATGAATTGTT TTTTGAATTA CGGCAAAAGC TAGAACAAAC TTTTGTATTA GCTACGCATA ATCAGCTCCT AGCTGATATG GCAGATAGAA AACTTTATAT ACAAGATGGT AGCCTTGTGC CTAGGGATAT ATTTAGCAAC TTATAA
|
Protein sequence | MSVVFTSLLT ATSITKSYGK LQILKGIDLQ VAQGEIVAIM GASGAGKSTL LHILATLDKP DSGTLYLGQD DLISLRGNKL AAFRNQHIGF IFQSHNLLSE FTALENVCLP GYIGKFDERS VRERAKELLV LLGLEARMQH KPTTLSGGEQ QRVAVARALI NNPRIVFADE PSGSLDSRNA LALHELFFEL RQKLEQTFVL ATHNQLLADM ADRKLYIQDG SLVPRDIFSN L
|
| |