| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aasi_0618 |
|---|
| Symbol | |
|---|
| ID | 6376655 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Candidatus Amoebophilus asiaticus 5a2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010830 |
|---|
| Strand | - |
|---|
| Start bp | 797749 |
|---|
| End bp | 799260 |
|---|
| Gene Length | 1512 bp |
|---|
| Protein Length | 503 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 642681771 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001957745 |
|---|
| Protein GI | 189502028 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0265] Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain |
|---|
| TIGRFAM ID | [TIGR02037] periplasmic serine protease, Do/DeqQ family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCCTACA AAAAACAAAA AAAGAATCTT TACATTATTT CGTTGGTTGT GATCCTGTGT
GCAATCACAT TAAGTTTATA CTCATTATTT AATTCTAATA GAAACCAACC AATTGGTAAG
CGATCGGCTA CTAACCAACA GCATTCTATA CAGCTTACTC AGCTTACTGT TCCCACAACT
CCAATAGCGC CAGAAACTCC TAACTTCGTT TCTGCAGCGC AAAAAGCTAC ACCTGCTGTA
GTACATATCA CAGCTAAGTA TGAAGCTAAA ATTATGCGTA GAGGTACTAG CCCTATAGAG
GAACTATTTA AAGATTTTCT TGGAGAAGGA TTTGAATTAG GCCCTAAAGA ATATAAAACA
CAGCCTGGTG CAGCTTTTGG TTCTGGTGTT ATTATTAGTG AAGACGGATA TATTGTTACT
AATAACCATG TTATAGATAA GGCTGACCAA ATTGAAGTAA CATTAGATGA TAACCGCAGG
TATACTGCCA AAGTGGTAGG CACTGATCCT GACACTGACT TAGCGCTCTT AAAAATAGAA
GAAAAAAAGT TATCCTTCTT AGTATTTGGA GATTCTGATA AGCTTCAAGT AGGTGAATGG
GTGCTAGCTG TAGGTAACCC TTTTAACCTA ACTTCTACGG TTACCAAAGG GATCGTGAGT
GCCAAAGCTA GAAGAGCTGA TATAGCTAGA TCAGGAGGTG GCATAAAAAT TGAAGCATTT
ATTCAAACAG ATGCGGCTGT TAATAAAGGA AATAGTGGTG GTGCACTTGT TAACCTACAA
GGTGAGCTAG TAGGCATCAA TACAGCTATT TCTACACCTA CCGGTGCGTT TGCTGGCTAT
TCTTTCGCTA TCCCCAGCTC TATTGTACAA CGTATTATTA GCGATCTAAA AAAGTATGGA
ACTGTACAAC GTGCTATATT AGGTATATTT CCTTTGGATG TAAATGCAGA CCTAGTAGAA
GAAAAGAAAT TAAAACGGTT TGATGGTGTT TACGTAAATG GATTCTCTGA ACGTAGTGCT
GCTGCTGAAG CAGGTTTAAA AGAAGGCGAT ATTATTATAG CTATTAATAA TACGAAAATT
AAGAATTTAG CTCAGTTACA TGAACATCTT ACTCACTACC AGCCAGGCGA TAAAGTAAAT
GTGTTGATAG ATAGAAAAGG AAAAGAAATT AATATTACAG TTACCCTTAA AAATGCTTTA
AATGAAATTA AAATTGTACA TGGGCAAGGT AGTATAGAAG TAGAAGGCGC TACCTTTGAA
CCCCTAGACC AAGCTACCAA GCAAAAGCTA GGCCTTAAAG CAGGTGTACA GATTAAGGGA
ATTAAAACAG GTAAATGGCA GCAAGCAGGC ATCAAGAAAG GCTTTATTGT TGTCGCAATT
GATAAAGAAC CTATTGAAAC CTTAGATCAG TTAGCAACCA TACTCAATAG TAAAAAAGGA
GGTATCCTGA TAGAAGGTAT TTATCCTAAT GGCACAAAAG CTTACTATGG AATAGGTTGG
GGCGATCTAT AA
|
|---|
| Protein sequence | MPYKKQKKNL YIISLVVILC AITLSLYSLF NSNRNQPIGK RSATNQQHSI QLTQLTVPTT
PIAPETPNFV SAAQKATPAV VHITAKYEAK IMRRGTSPIE ELFKDFLGEG FELGPKEYKT
QPGAAFGSGV IISEDGYIVT NNHVIDKADQ IEVTLDDNRR YTAKVVGTDP DTDLALLKIE
EKKLSFLVFG DSDKLQVGEW VLAVGNPFNL TSTVTKGIVS AKARRADIAR SGGGIKIEAF
IQTDAAVNKG NSGGALVNLQ GELVGINTAI STPTGAFAGY SFAIPSSIVQ RIISDLKKYG
TVQRAILGIF PLDVNADLVE EKKLKRFDGV YVNGFSERSA AAEAGLKEGD IIIAINNTKI
KNLAQLHEHL THYQPGDKVN VLIDRKGKEI NITVTLKNAL NEIKIVHGQG SIEVEGATFE
PLDQATKQKL GLKAGVQIKG IKTGKWQQAG IKKGFIVVAI DKEPIETLDQ LATILNSKKG
GILIEGIYPN GTKAYYGIGW GDL
|
|---|
| |