Gene Aasi_0229 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAasi_0229 
Symbol 
ID6376541 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Amoebophilus asiaticus 5a2 
KingdomBacteria 
Replicon accessionNC_010830 
Strand
Start bp258254 
End bp259426 
Gene Length1173 bp 
Protein Length390 aa 
Translation table11 
GC content37% 
IMG OID642681417 
Producthypothetical protein 
Protein accessionYP_001957402 
Protein GI189501685 
COG category[S] Function unknown 
COG ID[COG3876] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.925038 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCTTCC GTTGGTTGCT AACCTTATCA TTTATCCTAT TAAGTTATCC TTTTACTATA 
ACGGCTCATA CTGCCTCTCA AGTAATTACG GGTGCTGAAC AGCTGGACGC ATATTTACCT
AAATTAAGAA ATAAAAATAT TGCAGTTATA GCGAATGCAG CTTCCCAAGT AAAGGGAGTG
CATTTAGTTG ATATATTATT GAAGCATGGT GTAATAATTA AAAAGATATT GGCTCCTGAA
CATGGCTTTA GAGGTCAAAA AGATGCTGGG GAATTTGATG AAGATACCAT AGATACGCGC
ACAGGTATAG AAATTGTGTC ACTATATAAG CAGCAATCAA AAAGACTTAC CCCTTCTATG
TTAGAAGGGA TAGACTTGGT TATTTTTGAT ATTCAGGATG TTGGAGTTCG CTTCTTTACC
TATATCAGTA CATTGCATTA TGTGATGGAA GCGTGTGTTT CCTGTTCCAA ACCATTATTG
TTACTAGATA GGCCTAATCC CAATGCACAT TATGTAGATG GGCCTGTGCT AGAAAAGCAT
GTACAATCTT TTATAGGCAT GCATCCTATT CCTATTGTAT ATGGTCTTAC CATAGGTGAG
TTGGCGAGCA TGATCAATGA GGAAGGGTGG TTAAAAGATG GGTTAAAATG TAATTTAGAA
ATTATATCAC TCAAAAACTA TACCCACCAA ACTGGCTATG AATTACCACA TAAGCCCTCA
CCGAATTTAG CCAACAGGCA GGCTGTAGCA CTCTATCCTT CTTTAGGGCT TTTTGAAGGA
ACCATTATGA GTGTTGGGAG GGGCACAGAT TATCCTTTTC AGGTAATCGG TTATCCAGAT
AAAACCTGGG GTAATTTTAA TTTTATTCCT GTTAGTATAC CGGGCATGGC TACTTCGCCC
AAATATCAAG ATAAGCAATG TTATGGGCTT GACCTTCGAG AGGTGATACC TAGCTCTTTT
ATTAAACTAG CTTATCTATT ACATTTTTAT AAATTAGCCA AAGAACAGAA TATACCTTTC
TTTGAGAAAA GTTTTGACTT ACATGCAGGT CATGCAACTC TTCGACAGCA AATAGAAGCA
GGCCTGTCTG AAAAAGAAAT AAGAGCTAGT TGGCAAGCAG ATTTAAACAG ATATAAGATT
TTACGTAAAA ATTATTTACT TTATCCAGAA TAA
 
Protein sequence
MTFRWLLTLS FILLSYPFTI TAHTASQVIT GAEQLDAYLP KLRNKNIAVI ANAASQVKGV 
HLVDILLKHG VIIKKILAPE HGFRGQKDAG EFDEDTIDTR TGIEIVSLYK QQSKRLTPSM
LEGIDLVIFD IQDVGVRFFT YISTLHYVME ACVSCSKPLL LLDRPNPNAH YVDGPVLEKH
VQSFIGMHPI PIVYGLTIGE LASMINEEGW LKDGLKCNLE IISLKNYTHQ TGYELPHKPS
PNLANRQAVA LYPSLGLFEG TIMSVGRGTD YPFQVIGYPD KTWGNFNFIP VSIPGMATSP
KYQDKQCYGL DLREVIPSSF IKLAYLLHFY KLAKEQNIPF FEKSFDLHAG HATLRQQIEA
GLSEKEIRAS WQADLNRYKI LRKNYLLYPE