Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Aasi_0138 |
Symbol | nusA |
ID | 6376489 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Amoebophilus asiaticus 5a2 |
Kingdom | Bacteria |
Replicon accession | NC_010830 |
Strand | + |
Start bp | 158679 |
End bp | 159914 |
Gene Length | 1236 bp |
Protein Length | 411 aa |
Translation table | 11 |
GC content | 33% |
IMG OID | 642681328 |
Product | transcription elongation factor NusA |
Protein accession | YP_001957313 |
Protein GI | 189501596 |
COG category | [K] Transcription |
COG ID | [COG0195] Transcription elongation factor |
TIGRFAM ID | [TIGR01953] transcription termination factor NusA |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAGAGTA AAAAACTAAT TGAGACATTT GCGGAATTTG CTAGATCTAA AAATGTAGAT CGGCCTACGG TAATCAGAAT CTTGGAAGAA GTATTCAAGG CAATGATTCA TAAAAAGTTT GGAACAGATG ATAATTTTGA CATTATTATC AACCTAGACC AAGGCGACTT ACAAATATGG CGCTTTAGAG AAGTGGTAGA TGATAATTCT GAGGATATTT GGGACCATGA TAAGATCAGC TTATCTGAAG CAAAGAAAAT AGAAGAAGAT TTTAATATTG GAGAAGAAGT ATCAGAAGAA ATTAGTGTAG ATAGTTTTGG AAGACGAGCT ATTACTGCTG CTAGACAAAC ACTTATCCAA AAAGTAAAAG ATTTGGAAAA GGATGCTTTA TACTTGAAAT ATACGCAACT TATTGGAGAA ATGATTACTG TGGAAGTACA TCAAATACTT CCTCAAGAAG TCATTTTAGT TGATGAAGAA AGAAAAGAGC TATTTTTGCC TAAATCAGAA CAGATATTTA AGGATATCTT TAAAAAAGGT GAATATATAA GAGCTGTAGT ACACCGAATA GACCTACAAA AAAGTACTCC TAAAGTTATT CTTTCTAGGA CCTCCCCTAT ATTCTTAGAA AGGCTGTTTG AAAGTGAAGT TCCAGAAATT TTTGATGGTA TCATAACTAT TAAAAAAGTA GTACGTGAGC CTGGAGAAAG AGCAAAAGTC GCTGTAGAAT CCCTAGATGA TAGAATAGAT CCTGTAGGCG CTTGTGTAGG CATCAAAGGT TCTAGAATAC ACAGTATTGT TAGAGAATTA CAAAATGAAA ATATTGATGT TATTAACTAT ACTGATAATT TAGAACTTTA TATCAGTCGT GCTTTAAGCC CTGCGAAGAT AAGTAGTATA CAAATGAAAG GAGATAGAGT AGCTGTGTAT CTAAAACCAG ACCAAGTCTC ATTAGCAATA GGAAAAGGGG GCCAAAATAT AAAACTGGCT AGTAGACTTG TGGATAGAGA AATAGACGTA TACAGAGAGG TTGATAGTAT TGGTGAAGAT GTAAATTTAG AAGAATTTGC TGATGAAATA GAGCCTTGGA TTATCGACGA ACTAAAAAAA ACAGGCCTTG ATAGTGCTAA AAGTGTTTTA GCAATACCTA AAGAAGATTT AGAGCGAAGA ACAGACCTAG AAAAAGAAAC TATTGATGAG CTTTATAGAG TATTAAAACA AGAATTTGAA GAATAA
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Protein sequence | MESKKLIETF AEFARSKNVD RPTVIRILEE VFKAMIHKKF GTDDNFDIII NLDQGDLQIW RFREVVDDNS EDIWDHDKIS LSEAKKIEED FNIGEEVSEE ISVDSFGRRA ITAARQTLIQ KVKDLEKDAL YLKYTQLIGE MITVEVHQIL PQEVILVDEE RKELFLPKSE QIFKDIFKKG EYIRAVVHRI DLQKSTPKVI LSRTSPIFLE RLFESEVPEI FDGIITIKKV VREPGERAKV AVESLDDRID PVGACVGIKG SRIHSIVREL QNENIDVINY TDNLELYISR ALSPAKISSI QMKGDRVAVY LKPDQVSLAI GKGGQNIKLA SRLVDREIDV YREVDSIGED VNLEEFADEI EPWIIDELKK TGLDSAKSVL AIPKEDLERR TDLEKETIDE LYRVLKQEFE E
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