| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aasi_0083 |
|---|
| Symbol | |
|---|
| ID | 6376572 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Candidatus Amoebophilus asiaticus 5a2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010830 |
|---|
| Strand | - |
|---|
| Start bp | 97707 |
|---|
| End bp | 98741 |
|---|
| Gene Length | 1035 bp |
|---|
| Protein Length | 344 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 35% |
|---|
| IMG OID | 642681275 |
|---|
| Product | peptidase U61 LD-carboxypeptidase A |
|---|
| Protein accession | YP_001957261 |
|---|
| Protein GI | 189501544 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG1619] Uncharacterized proteins, homologs of microcin C7 resistance protein MccF |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGGGCTC ACATTTTTTC TCTAAGATTT TATATACTCA TAGGATTATT CTATTTTATC
CTTTCTCAAT TCTTTAATAT TGCAAATGGA CAAGGTAAGT TGCTACAAGG ACAAAATATG
CCTTTAGTTT TCCCTCCATT ATTAAAGCAG CAAGATAGAG TGGCTATAGT AGCTCCCGCT
TGGTGGGCTA TAGATAAAGA TATAACATTA AAGCAAACAA AGGAGATCTT ACAAAGCTGG
GGCTTAGAAG TTATAATTGG TAAAAGTATA GGACCTAGAT GTGGTCAGTT TGCAGGAAAT
GATAATTTGC GATTAAATGA CCTACAAGCT ATGTTAGACG ATCCTACTAT CAAAGCTATA
TTTGCTTATA GGGGAGGACA TGGAACAACG CGCATTATAG ATAAATTAGA ATTTACTAGA
TTTTTACAAT ATCCTAAGTG GCTGATAGGA TTTAGTGATC TTACCACTAT GCATTTAAAA
CTTCACCAAT TAGGAGTAGT ATCAATTCAT GGTGAGATGC CTAGGCATTT TCCAGATAGT
CTTTATCAAA GCTCAATAAA TAGCTTAAAA TTAGCTTTGT TCACAGGTAC TACAAAACTT
ACTGCTAAAC CTAATATACA TAATAGGGTA GGAGATGTTT CAGCACCAGT GGTAGGTGGT
AATCTAATGA TGATATGTGC TAATATAGGT ACTGAAATAG ACTTAGATAC AAAAGGTAAA
ATATTAGTAC TAGAAGATGT GGGCGAGCAG CTTTATGCCA TAGACCGTAT GTTAGTACAG
TTGAAAAGGA CAGGTAAATT AGCACATTTG GCTGGACTTA TAGTAGGAAG TATGGTAGGC
ATGCAAGATA AAAAGCATAT GGCCTTTGGT AAGTCTGTGC AGGCTATTAT CAAAGAGCAT
GTGACAGAAT ATCAATTTCC TGTGGCTTTT AATTTCCCTA TTGGACATAA GGCACCTAAT
ATAGCTTTTA TACATGGAGC CATAGGTACC TTGTCTGTCA CAGAAGAATC AGTAGCACTT
TCTTTTGATA CTTAA
|
|---|
| Protein sequence | MRAHIFSLRF YILIGLFYFI LSQFFNIANG QGKLLQGQNM PLVFPPLLKQ QDRVAIVAPA
WWAIDKDITL KQTKEILQSW GLEVIIGKSI GPRCGQFAGN DNLRLNDLQA MLDDPTIKAI
FAYRGGHGTT RIIDKLEFTR FLQYPKWLIG FSDLTTMHLK LHQLGVVSIH GEMPRHFPDS
LYQSSINSLK LALFTGTTKL TAKPNIHNRV GDVSAPVVGG NLMMICANIG TEIDLDTKGK
ILVLEDVGEQ LYAIDRMLVQ LKRTGKLAHL AGLIVGSMVG MQDKKHMAFG KSVQAIIKEH
VTEYQFPVAF NFPIGHKAPN IAFIHGAIGT LSVTEESVAL SFDT
|
|---|
| |