Gene Aaci_3006 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAaci_3006 
Symbol 
ID8417516 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 
KingdomBacteria 
Replicon accessionNC_013206 
Strand- 
Start bp47716 
End bp48027 
Gene Length312 bp 
Protein Length103 aa 
Translation table11 
GC content57% 
IMG OID645029132 
ProductPeptidoglycan-binding lysin domain protein 
Protein accessionYP_003186398 
Protein GI257792999 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.522345 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGGAAAC TCAACCAATA TGCCGGCTGG CTCGCCATCG CGACCTGCTT GATCAGTTTG 
CTCATGCTAC GCTTCGTTCC GCCCGTTTTC ACGGGTTGGA CCAATGTCAT CGTAGCCCCT 
GGGCAAACGC TGTGGTCGCT TGCCGAGAAG TGTCCGGCCA ATCCGTGGGA TGTGGTGAAT 
GCCATTGCGG CACAGAACCA CATCTCCCCG GACGAACCCC TGCAACCAGG CGAAGTCCTG 
CAAGTGCCGA CGAAAACGTC GCCCTTCTGG ACTCGGCTGG TTTTTTCATT TGAAGGAGGG 
AATCACGCAT GA
 
Protein sequence
MRKLNQYAGW LAIATCLISL LMLRFVPPVF TGWTNVIVAP GQTLWSLAEK CPANPWDVVN 
AIAAQNHISP DEPLQPGEVL QVPTKTSPFW TRLVFSFEGG NHA