Gene Aaci_3004 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAaci_3004 
Symbol 
ID8417514 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 
KingdomBacteria 
Replicon accessionNC_013206 
Strand- 
Start bp46018 
End bp46461 
Gene Length444 bp 
Protein Length147 aa 
Translation table11 
GC content52% 
IMG OID645029130 
ProductDNA repair protein RadC 
Protein accessionYP_003186396 
Protein GI257792997 
COG category[L] Replication, recombination and repair 
COG ID[COG2003] DNA repair proteins 
TIGRFAM ID[TIGR00608] DNA repair protein radc 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.00190795 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCATCCA TCACCGTCGT CCGGGTAGAA CTCGTCAAGG AACGATCACT TGAATATGAA 
GGTTCGCGGC TAATCCGGTG CGCCGAAGAC GCAGCAAACA TCCTTCGAGG TTACATCGGC 
AACGCGGATC GTGAAATGTT CGTAGTGATG GTCTTATCAG CCAAGCACAT CGTCAACGCG 
ATCAACACCG TTAGTCTCGG GATACTTGAC TCCTCTATCG TGCATCCACG GGAAGTATTT 
AAACCCGCGA TTCTGAGCAA TGCTGCATCG GTGATCGTGG GACACAATCA TCCAAGCGGG 
GATCCCGAGC CAAGTCCAGA AGACGTGGCA GTGACGCGCC GACTTGTGGA TGCGGGAAAA 
ATTCTAGGCA TTGATGTTTT GGATCACATT GTCATCGGAG ACGAAGGACG GTTCGTCAGT 
CTCAAGGCAA GAGAATTGCT CTGA
 
Protein sequence
MSSITVVRVE LVKERSLEYE GSRLIRCAED AANILRGYIG NADREMFVVM VLSAKHIVNA 
INTVSLGILD SSIVHPREVF KPAILSNAAS VIVGHNHPSG DPEPSPEDVA VTRRLVDAGK 
ILGIDVLDHI VIGDEGRFVS LKARELL