Gene Aaci_2848 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAaci_2848 
Symbol 
ID8426389 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 
KingdomBacteria 
Replicon accessionNC_013205 
Strand- 
Start bp2907424 
End bp2908476 
Gene Length1053 bp 
Protein Length350 aa 
Translation table11 
GC content58% 
IMG OID645028975 
Productaliphatic sulfonates family ABC transporter, periplsmic ligand-binding protein 
Protein accessionYP_003186241 
Protein GI258512807 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components 
TIGRFAM ID[TIGR01728] ABC transporter, substrate-binding protein, aliphatic sulfonates family 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.503074 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAAGCGAC GTGATGCTTT CCTCATCTCA ACTTTCGCCG TGGTTCTGGC AGGGGCGGGT 
ATCTCCGCGG GTTTCGGCCA TGCACAGAAT CGCGCGGGTG CGACCGCTCA CACACAGGCC 
ACCTCTCTCG GCGAGGGTGT TTCAAAGGGG GCAGCAAGCA CCGCAAACCG CGGCGTGGTT 
CGCATCGGTT ATCAGTTGGA CGGGACCGAC ATCATTCTGA AGGCGAAAAA GTGGCTCGAC 
GAGGATCTGC AGAAAAAGGG CTACCGGGTG CAGTGGATCC AATTTGTCGG TGGGCCCCAA 
CTCCTGCAGG CGATGAACGC CGGCGCCATC GACTTCGGCG AGACGGGAGA CGCCCCGCCC 
ATCTTCGCGC AGGCCGCCGG TACGCCTTTG TTATACCTCG CGCATGAGCC TGCTGATCCG 
AAGGGCGAAG CCATCTTGGT GCCGCCCAAC TCTCCCATTC ACACTGTGAA GGACCTGAAA 
GGCAAGACCA TCGCGCTGAA CAAGGGCTCC AATGTGGAAT ACATGCTTGT TCAACAGCTC 
AAAAAGGCAG GCCTGACCAT CCACGATGTG ACGCTCGACT TCCTGACGCC TCCCAACGCC 
CGAGCCGCCT TCGAGGGGGG CAAGGTGGAC GCTTGGGCCA TTTGGGATCC ATACGAGGCA 
TCTGCTGAAA ACACGATGCA CGCGCGCGCC ATTGCGGACG GCACAGGAGT CACCAATAAT 
TATCAATTCT ACTACGTGAC TCGCTCCTTC GCGCAACAGC ACCCGGATAT CGTTCAGGAC 
TATCTCAGTG GGTTGGAACA GGCCGACGAG TGGGTCAACC AGCACAAGCT GGACACCGCG 
AAGTTACTGG CGCCGCAGAT GGACATCGAC GTGACCTCGC TGTACCAGTC GTTTGCCAAG 
CACCGTTTTG GCATCGAGCC GATTACCAAG GATATCGTGG CCGAACAGCA ATCCATTGCG 
AACGAGTTTT ATCAATTAGG TCTGATTCCG AATCCGATCC GCGTCCAGGA CGATGTCTGG 
CAGGGGACAT TCCATCTGCA CAAACTCCCA TGA
 
Protein sequence
MKRRDAFLIS TFAVVLAGAG ISAGFGHAQN RAGATAHTQA TSLGEGVSKG AASTANRGVV 
RIGYQLDGTD IILKAKKWLD EDLQKKGYRV QWIQFVGGPQ LLQAMNAGAI DFGETGDAPP 
IFAQAAGTPL LYLAHEPADP KGEAILVPPN SPIHTVKDLK GKTIALNKGS NVEYMLVQQL 
KKAGLTIHDV TLDFLTPPNA RAAFEGGKVD AWAIWDPYEA SAENTMHARA IADGTGVTNN 
YQFYYVTRSF AQQHPDIVQD YLSGLEQADE WVNQHKLDTA KLLAPQMDID VTSLYQSFAK 
HRFGIEPITK DIVAEQQSIA NEFYQLGLIP NPIRVQDDVW QGTFHLHKLP