Gene Aaci_2730 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAaci_2730 
Symbol 
ID8426271 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 
KingdomBacteria 
Replicon accessionNC_013205 
Strand
Start bp2795377 
End bp2796144 
Gene Length768 bp 
Protein Length255 aa 
Translation table11 
GC content68% 
IMG OID645028857 
ProductRNA methyltransferase, TrmH family, group 3 
Protein accessionYP_003186123 
Protein GI258512689 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0566] rRNA methylases 
TIGRFAM ID[TIGR00186] rRNA methylase, putative, group 3 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.751116 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACATGT CCATGAGAGA CGGCGCGCGG CGCCGATCGG CACAAGGAGA AGAGGCGGCC 
GATCTCGTCA AGGGCCGGCA CGCCGTGCTG GCGGCGCTTG AGAGTGAACG GCCCGTGAAC
AAGGTGTGGG TGGCGGAAGG CGCTTCCGGC ATGGACGCCA TCGTGGCGAA GGCGCGATCT
CGCGGCGTCG TGGTGCAGTT TGTGCCTCGG AGCCGGCTCG ACGAGATGGC GAGCGCGCAC
CAGGGGGTCA TCGCGCAGGT GGCACCGTAT GCCTATGTCG ATCTCGACGA CGTCATTCGG
CGCGACACGG GCTTTGCGCC GCTCGTCGTG GTGCTCGACG AGATCGCGGA CCCGCACAAC
TTTGGGGCGA TTTTGCGCAC GGCGGAGGCA TCGGGGGCGC AGGGCGTGGT CATCGGCAAG
CGCCGACAGG CGCAGGTCAC CGACGTCGTG GCGAAGGCCG CCGCAGGTGC GCTCGAGACG
TTGCCCGTGG CGCGCGTGGC GAACGTCGCG CAGGCGCTGC AGCGGCTGAA GCAGGCGGGT
TATTGGATTG TCGGCGCGGA CGTGGAGGCC AAGGTGCCCT ACACCGAGGT CGATTATCGG
GGGCCCACGG CCGTGGTCAT CGGCTCCGAG GGCCAAGGGA TGCGCCGGTG GGTTCGCGAG
CAGTGCGACT TTCTCGTGTC CATCCCGATT CTGGGCCGAG TGCAGAGTCT GAACGCCTCG
GTCGCGGCGG GGGTCCTGCT GTATGAAGCG GTCCGCCAGC GGGCGTAA
 
Protein sequence
MNMSMRDGAR RRSAQGEEAA DLVKGRHAVL AALESERPVN KVWVAEGASG MDAIVAKARS 
RGVVVQFVPR SRLDEMASAH QGVIAQVAPY AYVDLDDVIR RDTGFAPLVV VLDEIADPHN
FGAILRTAEA SGAQGVVIGK RRQAQVTDVV AKAAAGALET LPVARVANVA QALQRLKQAG
YWIVGADVEA KVPYTEVDYR GPTAVVIGSE GQGMRRWVRE QCDFLVSIPI LGRVQSLNAS
VAAGVLLYEA VRQRA