Gene Aaci_2429 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAaci_2429 
Symbol 
ID8425958 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 
KingdomBacteria 
Replicon accessionNC_013205 
Strand- 
Start bp2490322 
End bp2490966 
Gene Length645 bp 
Protein Length214 aa 
Translation table11 
GC content63% 
IMG OID645028547 
ProductMultidrug resistance efflux pump-like protein 
Protein accessionYP_003185824 
Protein GI258512390 
COG category[V] Defense mechanisms 
COG ID[COG1566] Multidrug resistance efflux pump 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.310054 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATGCAA GGCGGCTTCT CCTCATCCAG GTGATCATCC TCGTGGTTAT CCTCGCGGCC 
GGATTTGTGG GGTACTACTT CTATCACCAG TCGACGCTGT ACCTGAAGAC GGACGACGCC 
CAGGTCACCG GGCGGCAGAT TGTCATCACG GCGCCGGCCT CCGGCGAGCT CACCTCGTGG 
AACGGGACCG AAGGCGCGCA GTTTTCGGCC GGAGACGTGA TGGGCACCAT CAGCGTGCCT 
GGCGCGAAGG GCGCGACGGT CAGCGTGACC GCGCCGGAGA CCGCCACCAT TGTGCAGAAC 
CAGGCTGTGA ACCATCAGTT CGTCGTGGCT GGCACGCCTC TCGCGTACGC GTACAACCTG 
AACGATCTCT GGGTGACGGC GAACGTCAAG GAGACGGACA TCAACGACGT GCACGTCGGC 
CAGAACGTCG ACGTCTATGT GGACGCGTTT CCCGGCACGT CGTTCCAGGG CGTGGTACAG 
CAGATTGGCC TCGCGACCGC GGCCACGTTC TCGCTGCTCC CGCAGACGAA CAACAACGCG 
AACTTCACCA AGGTGACCCA GGTCATCCCG GTGCGCATCC GGCTTCAGAC CTACACGGGG 
CAACTGGTGC CTGGGATGAG CGCGACGGTC CGCATTCACA AATAA
 
Protein sequence
MNARRLLLIQ VIILVVILAA GFVGYYFYHQ STLYLKTDDA QVTGRQIVIT APASGELTSW 
NGTEGAQFSA GDVMGTISVP GAKGATVSVT APETATIVQN QAVNHQFVVA GTPLAYAYNL 
NDLWVTANVK ETDINDVHVG QNVDVYVDAF PGTSFQGVVQ QIGLATAATF SLLPQTNNNA 
NFTKVTQVIP VRIRLQTYTG QLVPGMSATV RIHK