Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Aaci_2378 |
Symbol | |
ID | 8425907 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 |
Kingdom | Bacteria |
Replicon accession | NC_013205 |
Strand | - |
Start bp | 2441193 |
End bp | 2441981 |
Gene Length | 789 bp |
Protein Length | 262 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 645028497 |
Product | transcriptional repressor CodY |
Protein accession | YP_003185774 |
Protein GI | 258512340 |
COG category | [K] Transcription |
COG ID | [COG4465] Pleiotropic transcriptional repressor |
TIGRFAM ID | [TIGR02787] GTP-sensing transcriptional pleiotropic repressor CodY |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.000000594267 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAGTTTGT TGGAACAGGT ACAAGAACTT GGGCAACTGT TGCACCGCTC GAACGAGCAG GTGGAATTTC AAGAAGTCGC GGAATTTTTG AGCCGCCTCA TGCAGTCGAA CGTGTACATC GTGGGGCGCA AGGGCAAGAT CCTCGGCTAT GGCGTCGCGG AGCACGAGCT GACCGAGGAG TGGCTGAACA TCATGACGCG GGAACAGCGG TTCCCGGGCG ACTTCAACAA ACACCTGCTG CGCATCGAGC AGACCATTGC AAATCTGACG GACGAGCAGA AGAAGCCGCT CTACGTGTTC TCCCCTGAGG AGAACGAGTC GTTCCGCTCC AAGCACCTGA TGATCACGCC CATCATCGGG GCGCGCGAGC GCCAGGGCAC GCTTCTGTTC GCGAGGTCCC AGCGGCCGTT CAACGAGGAC GACCAGATCC TGGCCGAGTA CGCGGCGACG GTCGTCGCGC TCGAGATTGT GCACTCCCGG CATCAGCAGA AGGAAGAGGA GAGCCGGCAG CGGGCGCTCG CCCATCTGGC GGTGGAATCG CTCAGCTTCT CCGAGCTGCA GGCCGCCAAG TACCTGCTGG ACGCGGTTCG CAACTCGCCA GAGGGCATTG TGGTGAGCAG CCAGATTGCG GATCAGCACG GCGTGACGCG CTCGGTGATT GTCAACAGCA TTCGGAAGCT GGAGAGCGCG GGCACCATCG AAAGCCGCTC GCTCGGCATG AAGGGCACGC ACCTCCGCAT CCTGAATCCT TACGTGGAAG AGGAGATCAA CCGCCAATTC GAGCGATGA
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Protein sequence | MSLLEQVQEL GQLLHRSNEQ VEFQEVAEFL SRLMQSNVYI VGRKGKILGY GVAEHELTEE WLNIMTREQR FPGDFNKHLL RIEQTIANLT DEQKKPLYVF SPEENESFRS KHLMITPIIG ARERQGTLLF ARSQRPFNED DQILAEYAAT VVALEIVHSR HQQKEEESRQ RALAHLAVES LSFSELQAAK YLLDAVRNSP EGIVVSSQIA DQHGVTRSVI VNSIRKLESA GTIESRSLGM KGTHLRILNP YVEEEINRQF ER
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