Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Aaci_2258 |
Symbol | |
ID | 8425786 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 |
Kingdom | Bacteria |
Replicon accession | NC_013205 |
Strand | - |
Start bp | 2316679 |
End bp | 2318454 |
Gene Length | 1776 bp |
Protein Length | 591 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 645028378 |
Product | extracellular solute-binding protein family 5 |
Protein accession | YP_003185656 |
Protein GI | 258512222 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.000000752385 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGCTCGTC AGAATAAGCG TCGGTGGTCG ACGCGGCTTG GAGCAGCGGC CGTCACTGTG GCGCTGGGCG CCGGTATCAT CGCGGGCTGT GGAACGCAGC AGAATACGTC GTCGAACTCC ACCACGAACA GCACGCAGAC CACCACCCAA CAACCCCAGA AGGGCGGCAC GCTCGTGGTA GCTCTCGCGC CGTCCACGAA CATCAACTGG TATTTGCCGC TGACGAATTC GGCTAACGCG AGCGTTTACA ACGCAGCATT GCAAATTCTT CTCTATCCGG GCGTCATCTA TATTGGCAGC AACTACGCCA TTGATTGGAA CGACAGCTTT GCCAGCAGCA TCGATTACAA CGCCTCAGGT ACGGTGTACA CCATTCACCT GAAGAAGAAC TGGGTGTGGT CGGACGGCAA ACCTGTGACC GCGCAGGATG TTGTATGGGA CTACGACTTG ATCAAAGCGA CGGACGAGTC GAACGTGCCG CCTTGGCCCA ACTACGCCGC TGGTTCCGGC GGTGTGCCGG CGAACGTCAA GAGCGTCGTC GCGCTCGACA AGTACACGGT GCAGATCACG CTCAAGAAGC CCGCGAACCA GCAGTGGTTC ATCTACAACG GCATCGGTCA GCTCACGGCT TTGCCTGAGC ACGCATGGAA CAAGTACCCC AACAATATGG CGCAGGAGAT CGCGTACCTT GGCAAAGAGG CCACCAATCC GAGCTTCTTC ACCGTGGTGG ATGGGCCTTT CAAACTCGTG AGCGCGAAGC AGAGTCAGGC GTGGGTGCTT GTTCCAAACC CGACGTTCGC GGGTCACAAG AGCACGCTGG ATAAGCTCAT CTTCCAGTAC GAGGGCTCGG CCGACGCAGA GTTTGCCGCG CTTCGCAGTG GCGCCGTGAA CTTGGGATAT CTCGATCCGG CGCAGTGGGC GTCTCGCGGC AGCCTGCTGA AGATCGGCTA CAAGATTGTG CCTGCCTACA ACTTTGGCTA CGATTTCATC GAGTTGAACC TGCAGAAGGG TTCGCCGCTC TATAGCGCGT TCAACGACCT GAAGGTCCGC GAGGCGCTGG AGTACGCGAT GAATCAGAAT GAGATTGACC AGGACATCTA TCACGGGTTC GCGCCGCCCC TCTACGGGCC GATTCCCGCG CAGCCGAAGA CGGTGTTCTA CGATCCCTCG CTCAACAATC TGTTCGCTTA CAACCCGGCG AAGGCGAAAC AGCTGCTCGA GTCGGACGGC TGGAAGTTGG AAAACGGCGT CATGACGAAG GACGGCCAGA AGCTCGAGTT CACCATGCTC GTCTCCTCCG GATCTGAGTC GACGCTGCAG GAGGCGGAGC TCGTGCAGCA GGACTGGAAG CAAATCGGCG TGGACGTGAC GCTGCAGCAG ATGCCGTTCA ACCAGGAAAT TGGGATCATG AGCGACACCA AGAACCCCGG CAAGTGGGCG GCGGCGGCCG GCACGGGCAT CACGTACGGC GGATCCTATC CATCCGGCGA GCAGTTGTTC GAGCCCGGCG GCCTGGACAA CTTCGGTTAC AACGATCCGA CGGCCGACAA GCTCATCGCG AAGACGACGG AGCCGGTCTC CTCGCAGGCC GAGAACATGA AGAACTTCTT CGCGTACGAG GACTATATCG CGAAACAGCT ACCCGTGCTG TGGCAGAACG TCCCGGCCAA CATCACGGTT ATCGCCCCAA ACGTGCACAA TGCCACGACG CAGGTGCTCA ATCCGACAAC CGGGTATTCG CTCCTCAACT ACATCTGGAT GTCCTCCAGC AAGTGA
|
Protein sequence | MARQNKRRWS TRLGAAAVTV ALGAGIIAGC GTQQNTSSNS TTNSTQTTTQ QPQKGGTLVV ALAPSTNINW YLPLTNSANA SVYNAALQIL LYPGVIYIGS NYAIDWNDSF ASSIDYNASG TVYTIHLKKN WVWSDGKPVT AQDVVWDYDL IKATDESNVP PWPNYAAGSG GVPANVKSVV ALDKYTVQIT LKKPANQQWF IYNGIGQLTA LPEHAWNKYP NNMAQEIAYL GKEATNPSFF TVVDGPFKLV SAKQSQAWVL VPNPTFAGHK STLDKLIFQY EGSADAEFAA LRSGAVNLGY LDPAQWASRG SLLKIGYKIV PAYNFGYDFI ELNLQKGSPL YSAFNDLKVR EALEYAMNQN EIDQDIYHGF APPLYGPIPA QPKTVFYDPS LNNLFAYNPA KAKQLLESDG WKLENGVMTK DGQKLEFTML VSSGSESTLQ EAELVQQDWK QIGVDVTLQQ MPFNQEIGIM SDTKNPGKWA AAAGTGITYG GSYPSGEQLF EPGGLDNFGY NDPTADKLIA KTTEPVSSQA ENMKNFFAYE DYIAKQLPVL WQNVPANITV IAPNVHNATT QVLNPTTGYS LLNYIWMSSS K
|
| |